{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1360004239461661056.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.3389/fpls.2014.00598"}},{"identifier":{"@type":"PMID","@value":"25408696"}}],"resourceType":"学術雑誌論文(journal article)","dc:title":[{"@value":"Integrated network analysis and effective tools in plant systems biology"}],"description":[{"notation":[{"@value":"One of the ultimate goals in plant systems biology is to elucidate the genotype-phenotype relationship in plant cellular systems. Integrated network analysis that combines omics data with mathematical models has received particular attention. Here we focus on the latest cutting-edge computational advances that facilitate their combination. We highlight (1) network visualization tools, (2) pathway analyses, (3) genome-scale metabolic reconstruction, and (4) the integration of high-throughput experimental data and mathematical models. Multi-omics data that contain the genome, transcriptome, proteome, and metabolome and mathematical models are expected to integrate and expand our knowledge of complex plant metabolisms."}]}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1420001326225010176","@type":"Researcher","personIdentifier":[{"@type":"KAKEN_RESEARCHERS","@value":"80415281"},{"@type":"NRID","@value":"1000080415281"},{"@type":"NRID","@value":"9000391954214"},{"@type":"NRID","@value":"9000256911064"},{"@type":"NRID","@value":"9000391937711"},{"@type":"NRID","@value":"9000391968932"},{"@type":"NRID","@value":"9000391944610"},{"@type":"NRID","@value":"9000391968925"},{"@type":"NRID","@value":"9000254840785"},{"@type":"NRID","@value":"9000413507136"},{"@type":"NRID","@value":"9000391942647"},{"@type":"NRID","@value":"9000391961588"},{"@type":"NRID","@value":"9000405640341"},{"@type":"NRID","@value":"9000403418995"},{"@type":"NRID","@value":"9000017179903"},{"@type":"NRID","@value":"9000413512029"},{"@type":"NRID","@value":"9000391942774"},{"@type":"NRID","@value":"9000391937516"},{"@type":"NRID","@value":"9000411112958"},{"@type":"NRID","@value":"9000391954200"},{"@type":"NRID","@value":"9000391956945"},{"@type":"NRID","@value":"9000016821484"},{"@type":"NRID","@value":"9000391927115"},{"@type":"NRID","@value":"9000413499422"},{"@type":"NRID","@value":"9000413507254"},{"@type":"NRID","@value":"9000391961521"},{"@type":"NRID","@value":"9000404635965"},{"@type":"NRID","@value":"9000002739476"},{"@type":"NRID","@value":"9000413486001"},{"@type":"NRID","@value":"9000391929142"},{"@type":"RESEARCHMAP","@value":"https://researchmap.jp/atsushi.fukushima"}],"foaf:name":[{"@value":"Atsushi Fukushima"}]},{"@id":"https://cir.nii.ac.jp/crid/1380004239461660682","@type":"Researcher","foaf:name":[{"@value":"Shigehiko Kanaya"}]},{"@id":"https://cir.nii.ac.jp/crid/1380004239461660560","@type":"Researcher","foaf:name":[{"@value":"Kozo Nishida"}]}],"publication":{"publicationIdentifier":[{"@type":"EISSN","@value":"1664462X"}],"prism:publicationName":[{"@value":"Frontiers in Plant Science"}],"dc:publisher":[{"@value":"Frontiers Media SA"}],"prism:publicationDate":"2014-11-04","prism:volume":"5","prism:startingPage":"598"},"reviewed":"false","dcterms:accessRights":"http://purl.org/coar/access_right/c_abf2","createdAt":"2014-11-04","modifiedAt":"2015-02-18","foaf:topic":[{"@id":"https://cir.nii.ac.jp/all?q=Network%20viewer","dc:title":"Network viewer"},{"@id":"https://cir.nii.ac.jp/all?q=Flux%20balance%20analysis","dc:title":"Flux balance analysis"},{"@id":"https://cir.nii.ac.jp/all?q=genome-scale%20metabolic%20reconstruction","dc:title":"genome-scale metabolic 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