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Cephalopod genomics: A plan of strategies and organization
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- Caroline B. Albertin
- 1Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, USA
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- Laure Bonnaud
- 2Muséum National d'Histoire Naturelle, Université Paris Diderot, Sorbonne Paris Cité, Paris, France
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- C. Titus Brown
- 3Departments of Computer Science and Engineering, and Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI, USA
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- Wendy J. Crookes-Goodson
- 4Soft Matter Materials Branch, Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright-Patterson AFB, OH, USA
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- Rute R. da Fonseca
- 5Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark
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- Carlo Di Cristo
- 6Department of Biological, Geological and Environmental Sciences, University of Sannio, Benevento, Italy
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- Brian P. Dilkes
- 7Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA
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- Eric Edsinger-Gonzales
- 8Department of Molecular and Cell Biology, University of California at Berkeley, Berkeley, CA, USA
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- Robert M. Freeman
- 9Department of Systems Biology, Harvard Medical School, Boston, MA, USA
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- Roger T. Hanlon
- 10Marine Biological Laboratory, Woods Hole, MA, USA
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- Kristen M. Koenig
- 11Institute of Cell and Molecular Biology, University of Texas at Austin, Austin, TX, USA
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- Annie R. Lindgren
- 12Department of Biology, Portland State University, Portland, OR, USA
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- Mark Q. Martindale
- 13Kewalo Marine Laboratory, University of Hawaii, Honolulu, HI, USA
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- Patrick Minx
- 14The Genome Institute, Washington University School of Medicine, St. Louis, MO, USA
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- Leonid L. Moroz
- 15Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL, USA
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- Marie-Therese Nödl
- 16Department of Theoretical Biology, University of Vienna, Vienna, Austria
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- Spencer V. Nyholm
- 17Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA
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- Atsushi Ogura
- 18Institute for Genome Research, University of Tokushima, Tokushima, Japan
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- Judit R. Pungor
- 19Hopkins Marine Station of Stanford University, Pacific Grove, CA, USA
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- Joshua J. C. Rosenthal
- 20Institute of Neurobiology, University of Puerto Rico Medical Sciences Campus, San Juan, PR, USA
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- Erich M. Schwarz
- 21Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA
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- Shuichi Shigeno
- 22Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan
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- Jan M. Strugnell
- 23Department of Genetics, La Trobe University, Bundoora, Victoria, Australia
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- Tim Wollesen
- 24Department of Integrative Zoology, University of Vienna, Vienna, Austria
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- Guojie Zhang
- 25BGI-Shenzhen, Shenzhen, China
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- Clifton W. Ragsdale
- 1Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, USA
Description
The Cephalopod Sequencing Consortium (CephSeq Consortium) was established at a NESCent Catalysis Group Meeting, "Paths to Cephalopod Genomics- Strategies, Choices, Organization," held in Durham, North Carolina, USA on May 24-27, 2012. Twenty-eight participants representing nine countries (Austria, Australia, China, Denmark, France, Italy, Japan, Spain and the USA) met to address the pressing need for genome sequencing of cephalopod mollusks. This group, drawn from cephalopod biologists, neuroscientists, developmental and evolutionary biologists, materials scientists, bioinformaticians and researchers active in sequencing, assembling and annotating genomes, agreed on a set of cephalopod species of particular importance for initial sequencing and developed strategies and an organization (CephSeq Consortium) to promote this sequencing. The conclusions and recommendations of this meeting are described in this white paper.
Journal
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- Standards in Genomic Sciences
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Standards in Genomic Sciences 7 (1), 175-188, 2012-09-26
Springer Science and Business Media LLC
