{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1361137045601005312.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.1104/pp.109.145813"}},{"identifier":{"@type":"URI","@value":"http://academic.oup.com/plphys/article-pdf/152/1/44/38106107/plphys_v152_1_44.pdf"}}],"dc:title":[{"@value":"TrichOME: A Comparative Omics Database for Plant Trichomes"}],"description":[{"type":"abstract","notation":[{"@value":"<jats:title>Abstract</jats:title><jats:p>Plant secretory trichomes have a unique capacity for chemical synthesis and secretion and have been described as biofactories for the production of natural products. However, until recently, most trichome-specific metabolic pathways and genes involved in various trichome developmental stages have remained unknown. Furthermore, only a very limited amount of plant trichome genomics information is available in scattered databases. We present an integrated “omics” database, TrichOME, to facilitate the study of plant trichomes. The database hosts a large volume of functional omics data, including expressed sequence tag/unigene sequences, microarray hybridizations from both trichome and control tissues, mass spectrometry-based trichome metabolite profiles, and trichome-related genes curated from published literature. The expressed sequence tag/unigene sequences have been annotated based upon sequence similarity with popular databases (e.g. Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Transporter Classification Database). The unigenes, metabolites, curated genes, and probe sets have been mapped against each other to enable comparative analysis. The database also integrates bioinformatics tools with a focus on the mining of trichome-specific genes in unigenes and microarray-based gene expression profiles. TrichOME is a valuable and unique resource for plant trichome research, since the genes and metabolites expressed in trichomes are often underrepresented in regular non-tissue-targeted cDNA libraries. TrichOME is freely available at http://www.planttrichome.org/.</jats:p>"}]}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1381137045601005187","@type":"Researcher","foaf:name":[{"@value":"Xinbin Dai"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005190","@type":"Researcher","foaf:name":[{"@value":"Guodong Wang"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005185","@type":"Researcher","foaf:name":[{"@value":"Dong Sik Yang"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005188","@type":"Researcher","foaf:name":[{"@value":"Yuhong Tang"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005312","@type":"Researcher","foaf:name":[{"@value":"Pierre Broun"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005186","@type":"Researcher","foaf:name":[{"@value":"M. David Marks"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005189","@type":"Researcher","foaf:name":[{"@value":"Lloyd W. Sumner"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005313","@type":"Researcher","foaf:name":[{"@value":"Richard A. Dixon"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]},{"@id":"https://cir.nii.ac.jp/crid/1381137045601005184","@type":"Researcher","foaf:name":[{"@value":"Patrick Xuechun Zhao"}],"jpcoar:affiliationName":[{"@value":"Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 (X.D., D.S.Y., Y.T., L.W.S., R.A.D., P.X.Z.); Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (G.W.); Nestleݩ R&D Center Tours, Plant Science and Technology, 37390 Notre-Dame D'Oeݩ, France (P.B.); and Department of Plant Biology, University of Minnesota, St. Pau"}]}],"publication":{"publicationIdentifier":[{"@type":"EISSN","@value":"15322548"}],"prism:publicationName":[{"@value":"Plant Physiology"}],"dc:publisher":[{"@value":"Oxford University Press (OUP)"}],"prism:publicationDate":"2009-11-25","prism:volume":"152","prism:number":"1","prism:startingPage":"44","prism:endingPage":"54"},"reviewed":"false","dc:rights":["https://creativecommons.org/licenses/by/4.0/"],"url":[{"@id":"http://academic.oup.com/plphys/article-pdf/152/1/44/38106107/plphys_v152_1_44.pdf"}],"createdAt":"2009-11-26","modifiedAt":"2023-05-27","relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1360567186932049664","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The cytochrome P450 CYP77A4 is involved in auxin-mediated patterning of the <i>Arabidopsis thaliana</i> embryo"}]},{"@id":"https://cir.nii.ac.jp/crid/1360848661765300736","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Quantitative assay of targeted proteome in tomato trichome glandular cells using a large-scale selected reaction monitoring strategy"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204326606208","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Recent progress in secondary metabolism of plant glandular trichomes"}]}],"dataSourceIdentifier":[{"@type":"CROSSREF","@value":"10.1104/pp.109.145813"},{"@type":"CROSSREF","@value":"10.1242/dev.168369_references_DOI_Amtk6fkTnZS7N7hXvnc9zM7OroE"},{"@type":"CROSSREF","@value":"10.5511/plantbiotechnology.14.0701a_references_DOI_Amtk6fkTnZS7N7hXvnc9zM7OroE"},{"@type":"CROSSREF","@value":"10.1186/s13007-019-0427-7_references_DOI_Amtk6fkTnZS7N7hXvnc9zM7OroE"}]}