{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1361699995153535360.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.1111/efp.12666"}},{"identifier":{"@type":"URI","@value":"https://onlinelibrary.wiley.com/doi/pdf/10.1111/efp.12666"}},{"identifier":{"@type":"URI","@value":"https://onlinelibrary.wiley.com/doi/full-xml/10.1111/efp.12666"}}],"resourceType":"学術雑誌論文(journal article)","dc:title":[{"@value":"New microsatellite markers for the population studies of<i>Racodium therryanum</i>, a causal agent of snow blight in Japan"}],"description":[{"type":"abstract","notation":[{"@value":"<jats:title>Abstract</jats:title><jats:p>Snow mold fungi cause serious damage to the seedlings of some coniferous species in the boreal region where deep snow covers the seedlings in winter.<jats:italic>Racodium therryanum</jats:italic>is one of the fungi causing such damage in Japan. Neither sexual nor asexual spores of<jats:italic>R. therryanum</jats:italic>have been found in the field, and thus, the taxonomy and life cycle of this fungus is unclear. In this study, we developed seven microsatellite markers for population studies such as population structure, recombination and genetic diversity of<jats:italic>R. therryanum</jats:italic>through de novo genome assembly. Seven microsatellite markers were developed and applied for 133<jats:italic>R. therryanum</jats:italic>isolates from<jats:italic>Picea glehnii</jats:italic>,<jats:italic>P. jezoensis</jats:italic>and<jats:italic>Abies sachalinensis</jats:italic>in a nursery and two planted sites in forests (forest sites) situating 10–20 km apart. Little genetic differentiation between the two forest sites suggests that gene flow had occurred between the forest sites. The nursery population was characterized by low genetic diversity compared to the two forest sites. Discriminant analysis of principal components (DAPC) indicated three genetically differentiated clusters of<jats:italic>R. therryanum</jats:italic>which occurred sympatrically in each site. No dominant clusters were observed in the three host species, and no genetic differentiation was observed among the host species. The observed not significant linkage disequilibrium suggested the genetic recombination of<jats:italic>R. therryanum</jats:italic>. Microsatellite markers developed in this study can be useful for the further population studies of<jats:italic>R. therryanum</jats:italic>.</jats:p>"}]}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1381699995153535363","@type":"Researcher","foaf:name":[{"@value":"Ayuka Iwakiri"}],"jpcoar:affiliationName":[{"@value":"Department of Forest Science Graduate School of Agricultural and Life Sciences The University of Tokyo Tokyo Japan"}]},{"@id":"https://cir.nii.ac.jp/crid/1381699995153535362","@type":"Researcher","foaf:name":[{"@value":"Daisuke Sakaue"}],"jpcoar:affiliationName":[{"@value":"Chichibu Forest Graduate School of Agricultural and Life Sciences The University of Tokyo Chichibu Japan"}]},{"@id":"https://cir.nii.ac.jp/crid/1420001326215842560","@type":"Researcher","personIdentifier":[{"@type":"KAKEN_RESEARCHERS","@value":"00282567"},{"@type":"NRID","@value":"1000000282567"},{"@type":"NRID","@value":"9000402465141"},{"@type":"NRID","@value":"9000392048793"},{"@type":"NRID","@value":"9000001274908"},{"@type":"NRID","@value":"9000408595296"},{"@type":"NRID","@value":"9000325462923"},{"@type":"NRID","@value":"9000364993757"},{"@type":"NRID","@value":"9000001581689"},{"@type":"NRID","@value":"9000018856925"},{"@type":"NRID","@value":"9000410493312"},{"@type":"NRID","@value":"9000242732908"},{"@type":"NRID","@value":"9000409999926"},{"@type":"NRID","@value":"9000414374970"},{"@type":"NRID","@value":"9000376553348"},{"@type":"NRID","@value":"9000392055614"},{"@type":"RESEARCHMAP","@value":"https://researchmap.jp/read0046360"}],"foaf:name":[{"@value":"Norihisa Matsushita"}],"jpcoar:affiliationName":[{"@value":"Department of Forest Science Graduate School of Agricultural and Life Sciences The University of Tokyo Tokyo Japan"}]},{"@id":"https://cir.nii.ac.jp/crid/1381699995153535360","@type":"Researcher","foaf:name":[{"@value":"Kenji Fukuda"}],"jpcoar:affiliationName":[{"@value":"Department of Forest Science Graduate School of Agricultural and Life Sciences The University of Tokyo Tokyo Japan"}]}],"publication":{"publicationIdentifier":[{"@type":"PISSN","@value":"14374781"},{"@type":"EISSN","@value":"14390329"}],"prism:publicationName":[{"@value":"Forest 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regeneration on fallen logs"}]}],"relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1360013172190916224","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Analysis of Genotypic Diversity Data for Populations of Microorganisms"}]},{"@id":"https://cir.nii.ac.jp/crid/1360013172533635200","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Genetic differentiation and recombination among geographic populations of the fungal pathogen <i><scp>C</scp>olletotrichum truncatum</i> from chili peppers in <scp>C</scp>hina"}]},{"@id":"https://cir.nii.ac.jp/crid/1360019997833317504","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Tree Diseases And Disorders"}]},{"@id":"https://cir.nii.ac.jp/crid/1360285710484159232","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Genotype distribution of <i>Raffaelea quercivora</i> in the oak 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Their distribution on forest floors and pathogenicity to the seeds"},{"@value":"Fungi associated with natural regeneration of Picea jezoensis Carr. in seed stage—their distribution on forest floors and pathogenicity to the seeds"}]},{"@id":"https://cir.nii.ac.jp/crid/1570572700061192192","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Studies on mycoflora and diseases of coniferous trees at the central part of Hokkaido, Japan : special-reference to Ascomycetes, Fungi Imperfecti and Uredinales"}]},{"@id":"https://cir.nii.ac.jp/crid/1571980075810572160","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Studies on the snow molding of coniferous seedlings-II. Dark snow blight caused by Rhacodium therryanum Thuem"},{"@value":"Studies on the snow molding of coniferous seedlings‐II. Dark snow blight caused by Rhacodium therryanum Thuem"}]}],"dataSourceIdentifier":[{"@type":"CROSSREF","@value":"10.1111/efp.12666"},{"@type":"KAKEN","@value":"PRODUCT-23768317"},{"@type":"OPENAIRE","@value":"doi_dedup___::9df5084120711a7aa9f58833a84a83b4"},{"@type":"CROSSREF","@value":"10.47371/mycosci.2021.10.001_references_DOI_5iWgGbab138K3Rud08XXAmVieXy"},{"@type":"CROSSREF","@value":"10.47371/mycosci.2025.09.001_references_DOI_5iWgGbab138K3Rud08XXAmVieXy"}]}