{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1363670319910068096.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.1093/dnares/10.6.239"}},{"identifier":{"@type":"URI","@value":"http://academic.oup.com/dnaresearch/article-pdf/10/6/239/6930132/dnares_10_6_239.pdf"}},{"identifier":{"@type":"PMID","@value":"15029955"}},{"identifier":{"@type":"NAID","@value":"80016514005"}}],"dc:title":[{"@value":"Comprehensive Analysis of NAC Family Genes in Oryza sativa and Arabidopsis thaliana"}],"description":[{"notation":[{"@value":"The NAC domain was originally characterized from consensus sequences from petunia NAM and from Arabidopsis ATAF1, ATAF2, and CUC2. Genes containing the NAC domain (NAC family genes) are plant-specific transcriptional regulators and are expressed in various developmental stages and tissues. We performed a comprehensive analysis of NAC family genes in Oryza sativa (a monocot) and Arabidopsis thaliana (a dicot). We found 75 predicted NAC proteins in full-length cDNA data sets of O. sativa (28,469 clones) and 105 in putative genes (28,581 sequences) from the A. thaliana genome. NAC domains from both predicted and known NAC family proteins were classified into two groups and 18 subgroups by sequence similarity. There were a few differences in amino acid sequences in the NAC domains between O. sativa and A. thaliana. In addition, we found 13 common sequence motifs from transcriptional activation regions in the C-terminal regions of predicted NAC proteins. These motifs probably diverged having correlations with NAC domain structures. We discuss the relationship between the structure and function of the NAC family proteins in light of our results and the published data. Our results will aid further functional analysis of NAC family genes."}]}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1583105976574002816","@type":"Researcher","foaf:name":[{"@value":"H. Ooka"}]}],"publication":{"publicationIdentifier":[{"@type":"PISSN","@value":"13402838"},{"@type":"PISSN","@value":"https://id.crossref.org/issn/13402838"}],"prism:publicationName":[{"@value":"DNA Research"}],"dc:publisher":[{"@value":"Oxford University Press (OUP)"}],"prism:publicationDate":"2003-01-01","prism:volume":"10","prism:number":"6","prism:startingPage":"239","prism:endingPage":"247"},"reviewed":"false","dcterms:accessRights":"http://purl.org/coar/access_right/c_abf2","url":[{"@id":"http://academic.oup.com/dnaresearch/article-pdf/10/6/239/6930132/dnares_10_6_239.pdf"}],"createdAt":"2005-09-23","modifiedAt":"2017-08-23","foaf:topic":[{"@id":"https://cir.nii.ac.jp/all?q=Base%20Sequence","dc:title":"Base Sequence"},{"@id":"https://cir.nii.ac.jp/all?q=Sequence%20Homology,%20Amino%20Acid","dc:title":"Sequence Homology, Amino Acid"},{"@id":"https://cir.nii.ac.jp/all?q=Arabidopsis%20Proteins","dc:title":"Arabidopsis Proteins"},{"@id":"https://cir.nii.ac.jp/all?q=Arabidopsis","dc:title":"Arabidopsis"},{"@id":"https://cir.nii.ac.jp/all?q=Oryza","dc:title":"Oryza"},{"@id":"https://cir.nii.ac.jp/all?q=Genes,%20Plant","dc:title":"Genes, Plant"},{"@id":"https://cir.nii.ac.jp/all?q=Protein%20Structure,%20Tertiary","dc:title":"Protein Structure, Tertiary"},{"@id":"https://cir.nii.ac.jp/all?q=DNA-Binding%20Proteins","dc:title":"DNA-Binding Proteins"},{"@id":"https://cir.nii.ac.jp/all?q=Bacterial%20Proteins","dc:title":"Bacterial Proteins"},{"@id":"https://cir.nii.ac.jp/all?q=RNA,%20Plant","dc:title":"RNA, Plant"},{"@id":"https://cir.nii.ac.jp/all?q=Multigene%20Family","dc:title":"Multigene Family"},{"@id":"https://cir.nii.ac.jp/all?q=Cloning,%20Molecular","dc:title":"Cloning, Molecular"},{"@id":"https://cir.nii.ac.jp/all?q=Sequence%20Alignment","dc:title":"Sequence Alignment"},{"@id":"https://cir.nii.ac.jp/all?q=Phylogeny","dc:title":"Phylogeny"},{"@id":"https://cir.nii.ac.jp/all?q=Transcription%20Factors","dc:title":"Transcription Factors"}],"relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1050001202559900800","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"XTH20 and XTH19 regulated by ANAC071 under auxin flow are involved in cell proliferation in incised Arabidopsis inflorescence stems"},{"@value":"<i><scp>XTH</scp>20</i> and <i><scp>XTH</scp>19</i> regulated by <scp>ANAC</scp>071 under auxin flow are involved in cell proliferation in incised <i>Arabidopsis</i> inflorescence stems"}]},{"@id":"https://cir.nii.ac.jp/crid/1050001202647002752","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Spatially selective hormonal control of RAP2.6L and ANAC071 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rainforest tree <i>Gevuina avellana</i> (Proteaceae)"}]},{"@id":"https://cir.nii.ac.jp/crid/1360004233533878784","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The NAC transcription factor ANAC046 is a positive regulator of chlorophyll degradation and senescence in Arabidopsis leaves"}]},{"@id":"https://cir.nii.ac.jp/crid/1360004234172559360","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice"}]},{"@id":"https://cir.nii.ac.jp/crid/1360004234643996672","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Evolution of plant conducting cells: perspectives from key regulators of vascular cell 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