{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1363670321141594880.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.1007/s00792-004-0386-3"}},{"identifier":{"@type":"URI","@value":"http://link.springer.com/content/pdf/10.1007/s00792-004-0386-3.pdf"}},{"identifier":{"@type":"URI","@value":"http://link.springer.com/article/10.1007/s00792-004-0386-3/fulltext.html"}},{"identifier":{"@type":"URI","@value":"http://link.springer.com/content/pdf/10.1007/s00792-004-0386-3"}},{"identifier":{"@type":"PMID","@value":"15309563"}}],"dc:title":[{"@value":"Geochemical and microbiological evidence for a hydrogen-based, hyperthermophilic subsurface lithoautotrophic microbial ecosystem (HyperSLiME) beneath an active deep-sea hydrothermal field"}],"description":[{"notation":[{"@value":"Subsurface microbial communities supported by geologically and abiologically derived hydrogen and carbon dioxide from the Earth's interior are of great interest, not only with regard to the nature of primitive life on Earth, but as potential analogs for extraterrestrial life. Here, for the first time, we present geochemical and microbiological evidence pointing to the existence of hyperthermophilic subsurface lithoautotrophic microbial ecosystem (HyperSLiME) dominated by hyperthermophilic methanogens beneath an active deep-sea hydrothermal field in the Central Indian Ridge. Geochemical and isotopic analyses of gaseous components in the hydrothermal fluids revealed heterogeneity of both concentration and carbon isotopic compositions of methane between the main hydrothermal vent (0.08 mM and -13.8 per thousand PDB, respectively) and the adjacent divergent vent site (0.2 mM and -18.5 per thousand PDB, respectively), representing potential subsurface microbial methanogenesis, at least in the divergent vent emitting more 13C-depleted methane. Extremely high abundance of magmatic energy sources such as hydrogen (2.5 mM) in the fluids also encourages a hydrogen-based, lithoautotrophic microbial activity. Both cultivation and cultivation-independent molecular analyses suggested the predominance of Methanococcales members in the superheated hydrothermal emissions and chimney interiors along with the other major microbial components of Thermococcales members. These results imply that a HyperSLiME, consisting of methanogens and fermenters, occurs in this tectonically active subsurface zone, strongly supporting the existence of hydrogen-driven subsurface microbial communities."}]}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1383670321141594884","@type":"Researcher","foaf:name":[{"@value":"Ken Takai"}]},{"@id":"https://cir.nii.ac.jp/crid/1383670321141594883","@type":"Researcher","foaf:name":[{"@value":"Toshitaka Gamo"}]},{"@id":"https://cir.nii.ac.jp/crid/1383670321141594881","@type":"Researcher","foaf:name":[{"@value":"Urumu Tsunogai"}]},{"@id":"https://cir.nii.ac.jp/crid/1420001326211757952","@type":"Researcher","personIdentifier":[{"@type":"KAKEN_RESEARCHERS","@value":"60431772"},{"@type":"NRID","@value":"1000060431772"},{"@type":"NRID","@value":"9000392139453"},{"@type":"NRID","@value":"9000258402105"},{"@type":"NRID","@value":"9000345296612"},{"@type":"NRID","@value":"9000006894455"},{"@type":"NRID","@value":"9000397846105"},{"@type":"NRID","@value":"9000283726647"},{"@type":"NRID","@value":"9000324639871"},{"@type":"NRID","@value":"9000258405294"},{"@type":"NRID","@value":"9000017505720"},{"@type":"NRID","@value":"9000392139155"},{"@type":"NRID","@value":"9000283907300"},{"@type":"NRID","@value":"9000347226399"},{"@type":"NRID","@value":"9000392139472"},{"@type":"NRID","@value":"9000244880849"},{"@type":"NRID","@value":"9000347187653"},{"@type":"NRID","@value":"9000002624354"},{"@type":"NRID","@value":"9000347227023"},{"@type":"NRID","@value":"9000301715032"},{"@type":"NRID","@value":"9000000955158"},{"@type":"NRID","@value":"9000347226620"},{"@type":"NRID","@value":"9000398789692"},{"@type":"NRID","@value":"9000398988566"},{"@type":"NRID","@value":"9000002107621"},{"@type":"NRID","@value":"9000345296250"},{"@type":"NRID","@value":"9000392139253"},{"@type":"NRID","@value":"9000347187901"},{"@type":"NRID","@value":"9000329894213"},{"@type":"RESEARCHMAP","@value":"https://researchmap.jp/n-nakayama"}],"foaf:name":[{"@value":"Noriko Nakayama"}]},{"@id":"https://cir.nii.ac.jp/crid/1383670321141594882","@type":"Researcher","foaf:name":[{"@value":"Hisako Hirayama"}]},{"@id":"https://cir.nii.ac.jp/crid/1383670321141594880","@type":"Researcher","foaf:name":[{"@value":"Kenneth H. Nealson"}]},{"@id":"https://cir.nii.ac.jp/crid/1383670321141594885","@type":"Researcher","foaf:name":[{"@value":"Koki Horikoshi"}]}],"publication":{"publicationIdentifier":[{"@type":"PISSN","@value":"14310651"},{"@type":"EISSN","@value":"14334909"},{"@type":"PISSN","@value":"http://id.crossref.org/issn/14310651"},{"@type":"PISSN","@value":"https://id.crossref.org/issn/14310651"}],"prism:publicationName":[{"@value":"Extremophiles"}],"dc:publisher":[{"@value":"Springer Science and Business Media LLC"}],"prism:publicationDate":"2004-04-09","prism:volume":"8","prism:number":"4","prism:startingPage":"269","prism:endingPage":"282"},"reviewed":"false","dc:rights":["http://www.springer.com/tdm"],"url":[{"@id":"http://link.springer.com/content/pdf/10.1007/s00792-004-0386-3.pdf"},{"@id":"http://link.springer.com/article/10.1007/s00792-004-0386-3/fulltext.html"},{"@id":"http://link.springer.com/content/pdf/10.1007/s00792-004-0386-3"}],"createdAt":"2004-04-08","modifiedAt":"2021-06-15","foaf:topic":[{"@id":"https://cir.nii.ac.jp/all?q=Microbiological%20Techniques","dc:title":"Microbiological Techniques"},{"@id":"https://cir.nii.ac.jp/all?q=DNA,%20Complementary","dc:title":"DNA, Complementary"},{"@id":"https://cir.nii.ac.jp/all?q=Bacteria","dc:title":"Bacteria"},{"@id":"https://cir.nii.ac.jp/all?q=Base%20Sequence","dc:title":"Base Sequence"},{"@id":"https://cir.nii.ac.jp/all?q=Methanococcales","dc:title":"Methanococcales"},{"@id":"https://cir.nii.ac.jp/all?q=Geology","dc:title":"Geology"},{"@id":"https://cir.nii.ac.jp/all?q=Archaea","dc:title":"Archaea"},{"@id":"https://cir.nii.ac.jp/all?q=Seawater","dc:title":"Seawater"},{"@id":"https://cir.nii.ac.jp/all?q=Oligonucleotide%20Probes","dc:title":"Oligonucleotide Probes"},{"@id":"https://cir.nii.ac.jp/all?q=Ecosystem","dc:title":"Ecosystem"},{"@id":"https://cir.nii.ac.jp/all?q=Phylogeny","dc:title":"Phylogeny"},{"@id":"https://cir.nii.ac.jp/all?q=Hydrogen","dc:title":"Hydrogen"}],"relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1050020452813797888","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"A deeply branching thermophilic bacterium with an ancient acetyl-CoA pathway dominates a subsurface 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spring"}]},{"@id":"https://cir.nii.ac.jp/crid/1360567182088783104","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Microbial sulfate reduction within the Iheya North subseafloor hydrothermal system constrained by quadruple sulfur isotopes"}]},{"@id":"https://cir.nii.ac.jp/crid/1360567182303102976","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Serpentinization of olivine in troctolites and olivine gabbros from the Hess Deep Rift"}]},{"@id":"https://cir.nii.ac.jp/crid/1360567185472062720","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Fluid chemistry in the Solitaire and Dodo hydrothermal fields of the Central Indian Ridge"}]},{"@id":"https://cir.nii.ac.jp/crid/1360846643386332032","@type":"Article","resourceType":"学術雑誌論文(journal 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Trough"}]},{"@id":"https://cir.nii.ac.jp/crid/1360848657065250560","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Serpentinized troctolites exposed near the Kairei Hydrothermal Field, Central Indian Ridge: Insights into the origin of the Kairei hydrothermal fluid supporting a unique microbial ecosystem"}]},{"@id":"https://cir.nii.ac.jp/crid/1360849941818556544","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Nine requirements for the origin of Earth's life: Not at the hydrothermal vent, but in a nuclear geyser system"}]},{"@id":"https://cir.nii.ac.jp/crid/1360853567712624640","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Stable Abiotic Production of Ammonia from Nitrate in Komatiite-Hosted Hydrothermal Systems in the Hadean and Archean Oceans"}]},{"@id":"https://cir.nii.ac.jp/crid/1360857593654568064","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Chemical Nature of Hydrothermal Fluids Generated by Serpentinization and Carbonation of Komatiite: Implications for H<sub>2</sub>‐Rich Hydrothermal System and Ocean Chemistry in the Early Earth"}]},{"@id":"https://cir.nii.ac.jp/crid/1361131415957334912","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Experimental and Simulation Efforts in the Astrobiological Exploration of Exooceans"}]},{"@id":"https://cir.nii.ac.jp/crid/1361412893226762496","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Dual energy metabolism of the\n                    <i>Campylobacterota</i>\n                    endosymbiont in the chemosynthetic snail\n                    <i>Alviniconcha marisindica</i>"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204086725376","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Ultramafics-Hydrothermalism-Hydrogenesis-HyperSLiME (UltraH<SUP>3</SUP>) linkage: a key insight into early microbial ecosystem in the Archean deep-sea hydrothermal systems"},{"@value":"Ultramafics-Hydrothermalism-Hydrogenesis-HyperSLiME (UltraH3) linkage: a key insight into early microbial ecosystem in the Archean deep-se hydrothermal system"},{"@value":"Ultramafics–Hydrothermalism–Hydrogenesis–HyperSLiME (UltraH3) linkage: a key insight into early microbial ecosystem in the Archean deep-sea hydrothermal systems"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204228572288","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Physical and Chemical Diversity of Seafloor Hydrothermal Systems and Presentation of Associated Chemolithoautotrophic Ecosystem"},{"@language":"ja","@value":"海底熱水系の物理・化学的多様性と化学合成微生物生態系の存在様式"},{"@language":"ja-Kana","@value":"カイテイ ネッスイケイ ノ ブツリ カガクテキ タヨウセイ ト カガク ゴウセイ ビセイブツ セイタイケイ ノ ソンザイ ヨウシキ"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204228631552","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Experimental Approach to Obtain a Comprehensive Understanding of the Biogeochemistry of a Seafloor Hydrothermal System"},{"@language":"ja","@value":"海底熱水循環系の生物地球化学的理解に向けた実験的アプローチ"},{"@language":"ja-Kana","@value":"カイテイ ネッスイ ジュンカンケイ ノ セイブツ チキュウ カガクテキ リカイ ニ ムケタ ジッケンテキ アプローチ"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204229977728","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Elemental Mobilizations during Hydrothermal Alteration of Oceanic Lithosphere"},{"@language":"ja","@value":"海洋リソスフェアの熱水変質に伴う元素移動"},{"@value":"海洋リンスフェアの熱水変質に伴う元素移動 (特集号 地殻からマントルへ : モホ(面)とは何か?)"},{"@value":"海洋リンスフェアの熱水変質に伴う元素移動"},{"@language":"ja-Kana","@value":"カイヨウ リンスフェア ノ ネッスイ ヘンシツ ニ トモナウ ゲンソ イドウ"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204230144000","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Trans-crustal Advections and In-situ Biogeochemical Processes of Global Sub-seafloor Aquifer: The Sub-seafloor “TAIGA”"},{"@value":"海底下の大河"},{"@language":"ja-Kana","@value":"カイテイ カ ノ タイガ カイヨウ チカク ナイ ネッスイ ジュンカン ノ タヨウセイ ト セイブツ チキュウ カガク プロセス"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204230148224","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Kali Chimney: A Vigorous Black Smoker in the Kairei Hydrothermal Vent Field, Central Indian 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