{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1363951795418658432.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.1105/tpc.106.047399"}},{"identifier":{"@type":"URI","@value":"http://academic.oup.com/plcell/article-pdf/18/11/3158/36906071/plcell_v18_11_3158.pdf"}}],"dc:title":[{"@value":"SND1, a NAC Domain Transcription Factor, Is a Key Regulator of Secondary Wall Synthesis in Fibers of\n                    <i>Arabidopsis</i>"}],"description":[{"type":"abstract","notation":[{"@value":"<jats:title>Abstract</jats:title>\n                  <jats:p>Secondary walls in fibers and tracheary elements constitute the most abundant biomass produced by plants. Although a number of genes involved in the biosynthesis of secondary wall components have been characterized, little is known about the molecular mechanisms underlying the coordinated expression of these genes. Here, we demonstrate that the Arabidopsis thaliana NAC (for NAM, ATAF1/2, and CUC2) domain transcription factor, SND1 (for secondary wall–associated NAC domain protein), is a key transcriptional switch regulating secondary wall synthesis in fibers. We show that SND1 is expressed specifically in interfascicular fibers and xylary fibers in stems and that dominant repression of SND1 causes a drastic reduction in the secondary wall thickening of fibers. Ectopic overexpression of SND1 results in activation of the expression of secondary wall biosynthetic genes, leading to massive deposition of secondary walls in cells that are normally nonsclerenchymatous. In addition, we have found that SND1 upregulates the expression of several transcription factors that are highly expressed in fibers during secondary wall synthesis. Together, our results reveal that SND1 is a key transcriptional activator involved in secondary wall biosynthesis in fibers.</jats:p>"}]}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1383951795418658434","@type":"Researcher","foaf:name":[{"@value":"Ruiqin Zhong"}],"jpcoar:affiliationName":[{"@value":"Department of Plant Biology, University of Georgia, Athens, Georgia 30602"}]},{"@id":"https://cir.nii.ac.jp/crid/1383951795418658432","@type":"Researcher","foaf:name":[{"@value":"Taku Demura"}],"jpcoar:affiliationName":[{"@value":"RIKEN Plant Science Center, Yokohama, Kanagawa 230-0045, Japan"}]},{"@id":"https://cir.nii.ac.jp/crid/1383951795418658433","@type":"Researcher","foaf:name":[{"@value":"Zheng-Hua Ye"}],"jpcoar:affiliationName":[{"@value":"Department of Plant Biology, University of Georgia, Athens, Georgia 30602"}]}],"publication":{"publicationIdentifier":[{"@type":"EISSN","@value":"1532298X"},{"@type":"PISSN","@value":"https://id.crossref.org/issn/10404651"}],"prism:publicationName":[{"@value":"The Plant Cell"}],"dc:publisher":[{"@value":"Oxford University Press (OUP)"}],"prism:publicationDate":"2006-11-01","prism:volume":"18","prism:number":"11","prism:startingPage":"3158","prism:endingPage":"3170"},"reviewed":"false","dc:rights":["https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model"],"url":[{"@id":"http://academic.oup.com/plcell/article-pdf/18/11/3158/36906071/plcell_v18_11_3158.pdf"}],"createdAt":"2006-11-17","modifiedAt":"2021-08-04","relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1050009640091045760","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Identifying transcription factors that reduce wood recalcitrance and improve enzymatic degradation of xylem cell wall in Populus"}]},{"@id":"https://cir.nii.ac.jp/crid/1050287297269461376","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"MYB-mediated regulation of lignin biosynthesis in grasses"}]},{"@id":"https://cir.nii.ac.jp/crid/1050576502663844352","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"The atypical E2F transcription factor DEL1 modulates growth-defense tradeofs of host plants during root-knot nematode infection"},{"@value":"The atypical E2F transcription factor DEL1 modulates growth–defense tradeoffs of host plants during root-knot nematode infection"}]},{"@id":"https://cir.nii.ac.jp/crid/1360002215313815296","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63"}]},{"@id":"https://cir.nii.ac.jp/crid/1360002215350799104","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Responses to environmental stresses in woody plants: key to survive and longevity"}]},{"@id":"https://cir.nii.ac.jp/crid/1360002217651988736","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Identification of Transcription Factors Involved in Rice Secondary Cell Wall Formation"}]},{"@id":"https://cir.nii.ac.jp/crid/1360002217846587904","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"VASCULAR-RELATED NAC-DOMAIN6 and VASCULAR-RELATED NAC-DOMAIN7 Effectively Induce Transdifferentiation into Xylem Vessel Elements under Control of an Induction System"}]},{"@id":"https://cir.nii.ac.jp/crid/1360002218337514240","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The Plant Vascular System: Evolution, Development and Functions\n                    <sup>F</sup>"}]},{"@id":"https://cir.nii.ac.jp/crid/1360004231306704512","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Arabidopsis Group IIId ERF proteins positively regulate primary cell wall-type CESA genes"}]},{"@id":"https://cir.nii.ac.jp/crid/1360004232423062272","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Secondary cell wall patterning during xylem differentiation"}]},{"@id":"https://cir.nii.ac.jp/crid/1360004234643996672","@type":"Article","resourceType":"学術雑誌論文(journal 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for gelatinous layer deposition and posture control in gravi‐stimulated aspen"}]},{"@id":"https://cir.nii.ac.jp/crid/1360013168834222976","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Xylem vessel cell differentiation: A best model for new integrative cell biology?"}]},{"@id":"https://cir.nii.ac.jp/crid/1360017279835396224","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Secondary cell wall patterning—connecting the dots, pits and helices"}]},{"@id":"https://cir.nii.ac.jp/crid/1360283692628698752","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Survey of Genes Involved in Rice Secondary Cell Wall Formation Through a Co-Expression Network"}]},{"@id":"https://cir.nii.ac.jp/crid/1360283693332662912","@type":"Article","resourceType":"学術雑誌論文(journal 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homologs in Nicotiana benthamiana leaf cells induces ectopic secondary wall formation"}]},{"@id":"https://cir.nii.ac.jp/crid/1360306906095142784","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Expression of laccase and ascorbate oxidase affects lignin composition in Arabidopsis thaliana stems"}]},{"@id":"https://cir.nii.ac.jp/crid/1360565167801558016","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"VND-INTERACTING2, a NAC Domain Transcription Factor, Negatively Regulates Xylem Vessel Formation in <i>Arabidopsis</i>"}]},{"@id":"https://cir.nii.ac.jp/crid/1360565167801598592","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"<i>Arabidopsis</i>\n                    VASCULAR-RELATED NAC-DOMAIN6 Directly Regulates the Genes That Govern Programmed Cell Death and Secondary Wall Formation during Xylem Differentiation"}]},{"@id":"https://cir.nii.ac.jp/crid/1360565168590723456","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Regulatory Mechanisms for Specification and Patterning of Plant Vascular Tissues"}]},{"@id":"https://cir.nii.ac.jp/crid/1360567181373511680","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The cinnamate/monolignol pathway"}]},{"@id":"https://cir.nii.ac.jp/crid/1360567181885442048","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Technological Innovations Give Rise to a New Era of Plant Evolutionary Developmental Biology"}]},{"@id":"https://cir.nii.ac.jp/crid/1360567184692170752","@type":"Article","resourceType":"学術雑誌論文(journal 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SENSITIVE3 binding to bHLH and JAZ factors mediates control of cell wall plasticity in the root apex"}]},{"@id":"https://cir.nii.ac.jp/crid/1360576118786808704","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Histone Deacetylation Controls Xylem Vessel Cell Differentiation via Transcriptional Regulation of a Transcription Repressor Complex OFP1/4–MYB75–KNAT7–BLH6"}]},{"@id":"https://cir.nii.ac.jp/crid/1360579813420534784","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Enhancement of Secondary Cell Wall Formation in Poplar Xylem Using a Self-Reinforced System of Secondary Cell Wall-Related Transcription Factors"}]},{"@id":"https://cir.nii.ac.jp/crid/1360846642721072128","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The genome of the pear (<i>Pyrus bretschneideri</i> Rehd.)"}]},{"@id":"https://cir.nii.ac.jp/crid/1360846643135407360","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"VASCULAR‐RELATED NAC‐DOMAIN7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots"}]},{"@id":"https://cir.nii.ac.jp/crid/1360846643135545984","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"VASCULAR‐RELATED NAC‐DOMAIN 7 directly regulates the expression of a broad range of genes for xylem vessel formation"}]},{"@id":"https://cir.nii.ac.jp/crid/1360846645591549440","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"NAC-MYB-based transcriptional regulation of secondary cell wall biosynthesis in land 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Transcription Factors Regulate the Expression of VASCULAR-RELATED NAC-DOMAIN7, a Master Switch of Xylem Vessel Differentiation"}]},{"@id":"https://cir.nii.ac.jp/crid/1360849387529203584","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Transcriptional regulation of vascular cell fates"}]},{"@id":"https://cir.nii.ac.jp/crid/1360849945760098944","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Affinity‐based high‐resolution analysis of DNA binding by VASCULAR‐RELATED NAC‐DOMAIN7 via fluorescence correlation spectroscopy"}]},{"@id":"https://cir.nii.ac.jp/crid/1360853567481112704","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Fiber Cell-Specific Expression of the VP16-Fused Ethylene Response Factor 41 Protein Increases Biomass Yield and Alters Lignin Composition"}]},{"@id":"https://cir.nii.ac.jp/crid/1360857593647566592","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Plant-specific Dof transcription factors VASCULAR-RELATED DOF1 and VASCULAR-RELATED DOF2 regulate vascular cell differentiation and lignin biosynthesis in Arabidopsis"}]},{"@id":"https://cir.nii.ac.jp/crid/1360857593682991360","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"In Planta Cell Wall Engineering: From Mutants to Artificial Cell Walls"}]},{"@id":"https://cir.nii.ac.jp/crid/1360857593764847744","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Functional Analysis of Poplar Sombrero-Type NAC Transcription Factors Yields a Strategy to Modify Woody Cell Wall Properties"}]},{"@id":"https://cir.nii.ac.jp/crid/1361694370690262272","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"The Class II KNOX genes <i>KNAT3</i> and <i>KNAT7</i> work cooperatively to influence deposition of secondary cell walls that provide mechanical support to Arabidopsis stems"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204147729536","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Signaling, transcriptional regulation, and asynchronous pattern formation governing plant xylem development"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204199086080","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Transcriptional Regulation in Plant Secondary Wall Formation"},{"@language":"ja","@value":"植物二次細胞壁形成の転写制御機構"},{"@language":"ja-Kana","@value":"ショクブツ 2ジ サイボウヘキ ケイセイ ノ テンシャ セイギョ キコウ"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204326864768","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Continuous expression of genes for xylem cysteine peptidases in long-lived ray parenchyma cells in <i>Populus</i>"},{"@value":"Continuous expression of genes for xylem cysteine peptidases in long-lived ray parenchyma cells in Populus"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204327567104","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"ATL54, a RING-H2 domain protein selected by a gene co-expression network analysis, is associated with secondary cell wall formation in <i>Arabidopsis</i>"},{"@value":"ATL54, a RING-H2 domain protein selected by a gene co-expression network analysis, is associated with secondary cell wall formation in Arabidopsis"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204328402432","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"<i>ATL54</i>, a ubiquitin ligase gene related to secondary cell wall formation, is transcriptionally regulated by MYB46"},{"@value":"ATL54, a ubiquitin ligase gene related to secondary cell wall formation, is transcriptionally regulated by MYB46"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204329558016","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Transcriptional regulation of secondary wall formation controlled by NAC domain proteins"}]},{"@id":"https://cir.nii.ac.jp/crid/1390001204431583360","@type":"Article","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Cell Wall-Related Genes Involved in Supporting Tissue Formation and Transcriptional Regulation in Arabidopsis thaliana"}]},{"@id":"https://cir.nii.ac.jp/crid/1390012081165470720","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"High-transcriptional activation ability of bamboo SECONDARY WALL NAC transcription factors is derived from C-terminal domain"}]},{"@id":"https://cir.nii.ac.jp/crid/1390282679306170368","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"Possible contribution of TED6 and TED7, secondary cell wall-related membrane proteins, to evolution of tracheary element in angiosperm lineage"}]},{"@id":"https://cir.nii.ac.jp/crid/1390282679306212096","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@language":"en","@value":"ANAC075, a putative regulator of VASCULAR-RELATED NAC-DOMAIN7, is a repressor of 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