{"@context":{"@vocab":"https://cir.nii.ac.jp/schema/1.0/","rdfs":"http://www.w3.org/2000/01/rdf-schema#","dc":"http://purl.org/dc/elements/1.1/","dcterms":"http://purl.org/dc/terms/","foaf":"http://xmlns.com/foaf/0.1/","prism":"http://prismstandard.org/namespaces/basic/2.0/","cinii":"http://ci.nii.ac.jp/ns/1.0/","datacite":"https://schema.datacite.org/meta/kernel-4/","ndl":"http://ndl.go.jp/dcndl/terms/","jpcoar":"https://github.com/JPCOAR/schema/blob/master/2.0/"},"@id":"https://cir.nii.ac.jp/crid/1390001205472829312.json","@type":"Article","productIdentifier":[{"identifier":{"@type":"DOI","@value":"10.1266/ggs.81.181"}},{"identifier":{"@type":"NDL_BIB_ID","@value":"7997959"}},{"identifier":{"@type":"URI","@value":"http://id.ndl.go.jp/bib/7997959"}},{"identifier":{"@type":"URI","@value":"https://ndlsearch.ndl.go.jp/books/R000000004-I7997959"}},{"identifier":{"@type":"URI","@value":"http://www.jstage.jst.go.jp/article/ggs/81/3/81_3_181/_pdf"}},{"identifier":{"@type":"PMID","@value":"16905872"}},{"identifier":{"@type":"HANDLE","@value":"2440/23774"}},{"identifier":{"@type":"NAID","@value":"10018212681"}}],"dc:title":[{"@language":"en","@value":"Phylogenetic Analysis of Diprotodontian Marsupials Based on Complete Mitochondrial Genomes"}],"dc:language":"en","description":[{"type":"abstract","notation":[{"@language":"en","@value":"Australidelphia is the cohort, originally named by Szalay, of all Australian marsupials and the South American <i>Dromiciops</i>. A lot of mitochondria and nuclear genome studies support the hypothesis of a monophyly of Australidelphia, but some familial relationships in Australidelphia are still unclear. In particular, the familial relationships among the order Diprotodontia (koala, wombat, kangaroos and possums) are ambiguous. These Diprotodontian families are largely grouped into two suborders, Vombatiformes, which contains Phascolarctidae (koala) and Vombatidae (wombat), and Phalangerida, which contains Macropodidae, Potoroidae, Phalangeridae, Petauridae, Pseudocheiridae, Acrobatidae, Tarsipedidae and Burramyidae. Morphological evidence and some molecular analyses strongly support monophyly of the two families in Vombatiformes. The monophyly of Phalangerida as well as the phylogenetic relationships of families in Phalangerida remains uncertain, however, despite searches for morphological synapomorphy and mitochondrial DNA sequence analyses. Moreover, phylogenetic relationships among possum families (Phalangeridae, Petauridae, Pseudocheiridae, Acrobatidae, Tarsipedidae and Burramyidae) as well as a sister group of Macropodoidea (Macropodidae and Potoroidae) remain unclear. To evaluate familial relationships among <i>Dromiciops</i> and Australian marsupials as well as the familial relationships in Diprotodontia, we determined the complete mitochondrial sequence of six Diprotodontian species. We used Maximum Likelihood analyses with concatenated amino acid and codon sequences of 12 mitochondrial protein genomes. Our analysis of mitochondria amino acid sequence supports monophyly of Australian marsupials + <i>Dromiciops</i> and monophyly of Phalangerida. The close relatedness between Macropodidae and Phalangeridae is also weakly supported by our analysis.<br>"}],"abstractLicenseFlag":"disallow"}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1410001205472829313","@type":"Researcher","personIdentifier":[{"@type":"NRID","@value":"9000001822389"}],"foaf:name":[{"@language":"en","@value":"Munemasa Maruo"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology"}]},{"@id":"https://cir.nii.ac.jp/crid/1420282801189554176","@type":"Researcher","personIdentifier":[{"@type":"KAKEN_RESEARCHERS","@value":"70432010"},{"@type":"NRID","@value":"1000070432010"},{"@type":"NRID","@value":"9000333205915"},{"@type":"NRID","@value":"9000007275801"},{"@type":"NRID","@value":"9000004304840"},{"@type":"NRID","@value":"9000001822391"},{"@type":"NRID","@value":"9000381479050"},{"@type":"NRID","@value":"9000403540277"},{"@type":"NRID","@value":"9000403523814"},{"@type":"NRID","@value":"9000403540271"},{"@type":"NRID","@value":"9000335191357"},{"@type":"NRID","@value":"9000404822497"},{"@type":"NRID","@value":"9000258407180"},{"@type":"RESEARCHMAP","@value":"https://researchmap.jp/read0125178"}],"foaf:name":[{"@language":"en","@value":"Nikaido Masato"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology"}]},{"@id":"https://cir.nii.ac.jp/crid/1410001205472829317","@type":"Researcher","personIdentifier":[{"@type":"NRID","@value":"9000001822393"}],"foaf:name":[{"@language":"en","@value":"Donnellan Stephen"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Evolutionary Biology Unit, South Australian Museum"}]},{"@id":"https://cir.nii.ac.jp/crid/1410001205472829316","@type":"Researcher","personIdentifier":[{"@type":"NRID","@value":"9000001822395"}],"foaf:name":[{"@language":"en","@value":"Austin Christopher C."}],"jpcoar:affiliationName":[{"@language":"en","@value":"Museum of Natural Science, Louisiana State University"}]},{"@id":"https://cir.nii.ac.jp/crid/1420845751152452480","@type":"Researcher","personIdentifier":[{"@type":"KAKEN_RESEARCHERS","@value":"60132982"},{"@type":"NRID","@value":"1000060132982"},{"@type":"NRID","@value":"9000363248905"},{"@type":"NRID","@value":"9000383202558"},{"@type":"NRID","@value":"9000391622837"},{"@type":"NRID","@value":"9000002503743"},{"@type":"NRID","@value":"9000250175136"},{"@type":"NRID","@value":"9000347361433"},{"@type":"NRID","@value":"9000381479077"},{"@type":"NRID","@value":"9000252818856"},{"@type":"NRID","@value":"9000375911981"},{"@type":"NRID","@value":"9000415174016"},{"@type":"NRID","@value":"9000347491965"},{"@type":"NRID","@value":"9000250175298"},{"@type":"NRID","@value":"9000243713793"},{"@type":"NRID","@value":"9000020574695"},{"@type":"NRID","@value":"9000241462328"},{"@type":"NRID","@value":"9000253203552"},{"@type":"RESEARCHMAP","@value":"https://researchmap.jp/n_okada"}],"foaf:name":[{"@language":"en","@value":"Okada Norihiro"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology"},{"@language":"en","@value":"Department of Evolutionary Biology and Biodiversity, National Institute for Basic Biology"}]},{"@id":"https://cir.nii.ac.jp/crid/1410001205472829315","@type":"Researcher","personIdentifier":[{"@type":"NRID","@value":"9000001822397"}],"foaf:name":[{"@language":"en","@value":"Hasegawa Masami"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Institute of Statistical Mathematics"},{"@language":"en","@value":"Department of Biosystems Science, Graduate University for Advanced Studies"}]}],"publication":{"publicationIdentifier":[{"@type":"PISSN","@value":"13417568"},{"@type":"LISSN","@value":"13417568"},{"@type":"EISSN","@value":"18805779"},{"@type":"NDL_BIB_ID","@value":"000000156883"},{"@type":"ISSN","@value":"13417568"},{"@type":"NCID","@value":"AA11077421"}],"prism:publicationName":[{"@language":"en","@value":"Genes & Genetic Systems"},{"@language":"en","@value":"Genes Genet. Syst."}],"dc:publisher":[{"@language":"en","@value":"The Genetics Society of Japan"},{"@language":"ja","@value":"日本遺伝学会"}],"prism:publicationDate":"2006","prism:volume":"81","prism:number":"3","prism:startingPage":"181","prism:endingPage":"191"},"reviewed":"false","dcterms:accessRights":"http://purl.org/coar/access_right/c_abf2","url":[{"@id":"http://id.ndl.go.jp/bib/7997959"},{"@id":"https://ndlsearch.ndl.go.jp/books/R000000004-I7997959"},{"@id":"http://www.jstage.jst.go.jp/article/ggs/81/3/81_3_181/_pdf"}],"availableAt":"2006","foaf:topic":[{"@id":"https://cir.nii.ac.jp/all?q=complete%20mitochondrial%20genome","dc:title":"complete mitochondrial genome"},{"@id":"https://cir.nii.ac.jp/all?q=Marsupial","dc:title":"Marsupial"},{"@id":"https://cir.nii.ac.jp/all?q=Dromiciops","dc:title":"Dromiciops"},{"@id":"https://cir.nii.ac.jp/all?q=Phalangerida","dc:title":"Phalangerida"},{"@id":"https://cir.nii.ac.jp/all?q=phylogeny","dc:title":"phylogeny"}],"relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1360011143930099456","@type":"Article","relationType":["cites"],"jpcoar:relatedTitle":[{"@value":"PAML: a program package for phylogenetic analysis by maximum likelihood"}]},{"@id":"https://cir.nii.ac.jp/crid/1360011146047997568","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Evolutionary trees from DNA sequences: A maximum likelihood approach"}]},{"@id":"https://cir.nii.ac.jp/crid/1360292619483026432","@type":"Article","relationType":["references","cites"],"jpcoar:relatedTitle":[{"@value":"Confidence Limits on Phylogenies: An Approach Using the 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