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However, the pathways of IAA biosynthesis have not been completely understood. Although indole derivatives have been proposed to be intermediates of the pathway, it has not been thoroughly elucidated whether the proposed intermediates are indeed converted into an active auxin, IAA, or intermediate metabolites other than IAA. In the present work, we examined 11 indole derivatives whether they are indeed IAA intermediates. The indole derivatives were examined by measuring their effects on recovery from auxin-deficiency conditions caused by L-aminooxyphenylpropionic acid (AOPP), which we previously identified as an IAA biosynthesis inhibitor. We estimated auxin activity of each indole derivative by analyzing auxin-inducible marker gene expression and root morphology in <i>Arabidopsis</i>. We found that indole-3-pyruvic acid most effectively recovered seedlings from auxin deficiency among the indole derivatives examined, followed by <i>N</i>-hydroxyl tryptamine and indole-3-acetonitrile, with effective recovery from the auxin deficiency caused by AOPP. We also found that tryptophol recovered the root growth defects. Among the indole derivatives examined, only indole-3-acrylic acid did not show effective recovery from auxin deficiency. These results provide information on which compounds are reliable intermediates of IAA biosynthesis pathways in <i>Arabidopsis</i>."}],"abstractLicenseFlag":"disallow"}],"creator":[{"@id":"https://cir.nii.ac.jp/crid/1410282679304265475","@type":"Researcher","personIdentifier":[{"@type":"NRID","@value":"9000261673267"}],"foaf:name":[{"@language":"en","@value":"Ishida Yosuke"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Kihara Institute for Biological Research, Yokohama City University"},{"@language":"en","@value":"RIKEN Plant Science Center"},{"@language":"en","@value":"Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of 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Yukihisa"}],"jpcoar:affiliationName":[{"@language":"en","@value":"Kihara Institute for Biological Research, Yokohama City University"},{"@language":"en","@value":"RIKEN Plant Science Center"},{"@language":"en","@value":"Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo"}]}],"publication":{"publicationIdentifier":[{"@type":"PISSN","@value":"13424580"},{"@type":"LISSN","@value":"13424580"},{"@type":"EISSN","@value":"13476114"},{"@type":"CODEN","@value":"PLBIF6"},{"@type":"NDL_BIB_ID","@value":"000000157745"},{"@type":"ISSN","@value":"13424580"},{"@type":"NCID","@value":"AA11250821"}],"prism:publicationName":[{"@language":"en","@value":"Plant Biotechnology"},{"@language":"ja","@value":"Ｐｌａｎｔ　Ｂｉｏｔｅｃｈｎｏｌｏｇｙ"},{"@language":"en","@value":"Plant Biotechnology"},{"@language":"ja","@value":"Ｐｌａｎｔ　Ｂｉｏｔｅｃｈｎｏｌｏｇｙ"}],"dc:publisher":[{"@language":"en","@value":"Japanese Society for Plant Biotechnology"},{"@language":"ja","@value":"日本植物バイオテクノロジー学会"}],"prism:publicationDate":"2013","prism:volume":"30","prism:number":"2","prism:startingPage":"185","prism:endingPage":"190"},"reviewed":"false","dcterms:accessRights":"http://purl.org/coar/access_right/c_abf2","url":[{"@id":"http://id.ndl.go.jp/bib/024676651"},{"@id":"https://ndlsearch.ndl.go.jp/books/R000000004-I024676651"},{"@id":"https://dl.ndl.go.jp/pid/10205145"},{"@id":"http://hdl.handle.net/2237/9188"}],"availableAt":"2013","foaf:topic":[{"@id":"https://cir.nii.ac.jp/all?q=Auxin%20biosynthesis%20inhibitor","dc:title":"Auxin biosynthesis inhibitor"},{"@id":"https://cir.nii.ac.jp/all?q=auxin%20intermediates","dc:title":"auxin intermediates"},{"@id":"https://cir.nii.ac.jp/all?q=%3Csmall%3EL%3C/small%3E-aminooxyphenylpropionic%20acid.","dc:title":"<small>L</small>-aminooxyphenylpropionic acid."}],"project":[{"@id":"https://cir.nii.ac.jp/crid/1040000782164246144","@type":"Project","projectIdentifier":[{"@type":"KAKEN","@value":"23580144"},{"@type":"JGN","@value":"JP23580144"},{"@type":"URI","@value":"https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-23580144/"}],"notation":[{"@language":"ja","@value":"代謝中間体を利用したオーキシン生合成経路の解析"},{"@language":"en","@value":"The analysis of auxin biosynthetic pathway using metabolic intermediates"}]}],"relatedProduct":[{"@id":"https://cir.nii.ac.jp/crid/1360002217131546624","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF\n            <i>ARABIDOPSIS</i>\n            and YUCCAs in\n            <i>Arabidopsis</i>"}]},{"@id":"https://cir.nii.ac.jp/crid/1360011144212309760","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Biochemical analyses of 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Development"}]},{"@id":"https://cir.nii.ac.jp/crid/1360292621073584128","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Brassinolide Induces\n                    <i>IAA5, IAA19</i>\n                    , and DR5, a Synthetic Auxin Response Element in Arabidopsis, Implying a Cross Talk Point of Brassinosteroid and Auxin Signaling"}]},{"@id":"https://cir.nii.ac.jp/crid/1360846642061675904","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"The main auxin biosynthesis pathway in\n            <i>Arabidopsis</i>"}]},{"@id":"https://cir.nii.ac.jp/crid/1360848659102089216","@type":"Article","resourceType":"学術雑誌論文(journal article)","relationType":["isReferencedBy"],"jpcoar:relatedTitle":[{"@value":"Analysis of a putative auxin biosynthesis inhibitor, indole-3-oxoethylphosphonic acid, in <i>Arabidopsis</i>"}]},{"@id":"https://cir.nii.ac.jp/crid/1361699995017675008","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Metal-free artificial nucleases based on simple oxime and hydroxylamine scaffolds"}]},{"@id":"https://cir.nii.ac.jp/crid/1362262946126006784","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Trp-dependent auxin biosynthesis in <i>Arabidopsis</i>: involvement of cytochrome P450s CYP79B2 and CYP79B3"}]},{"@id":"https://cir.nii.ac.jp/crid/1362825895504754560","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Reassessing the Role of <i>N</i>-Hydroxytryptamine in Auxin Biosynthesis"}]},{"@id":"https://cir.nii.ac.jp/crid/1363107368956863488","@type":"Article","relationType":["references"],"jpcoar:relatedTitle":[{"@value":"Approaching Cellular and Molecular Resolution of Auxin Biosynthesis and 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