Bibliographic Information
- Other Title
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- XML pathway format comparison between Genomic Object Net and Systems Biology Markup Language Level 2
- GON ト SBML ニ オケル XML パスウェイ ケイシキ ノ タイオウ
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Description
In this paper, two formats of XML description in Genomic Object Net (GON) and System Biology Markup Language Level 2 (SBML Level 2) are compared. First, we discuss about the difference in representations of biological pathways with these two methods. Second, we compare these two formats step-by-step from small models to large models in the following order: (1) initial stage, (2) arrange one continuous place, (3) control variables, (4) arrange one continuous transition, (5) add arc from place to transition, and (6) several connections between elements. Based on these comparisons, we considered about problems which will be arise in performing conversion between these two formats, and discuss the method to improve these problems.
Journal
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- 大島商船高等専門学校紀要
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大島商船高等専門学校紀要 38 9-20, 2005-12
大島商船高等専門学校
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Keywords
Details 詳細情報について
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- CRID
- 1050564287575282048
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- NII Article ID
- 120005429417
- 110008739334
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- NII Book ID
- AN00031668
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- ISSN
- 03879232
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- NDL BIB ID
- 7870414
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- Text Lang
- ja
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- Article Type
- departmental bulletin paper
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- Data Source
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- IRDB
- NDL
- CiNii Articles