Sphingobium barthaii sp. nov., a high molecular weight polycyclic aromatic hydrocarbon-degrading bacterium isolated from cattle pasture soil
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- Allyn H. Maeda
- Department of Life and Environmental System Science, Graduate School of Nanobiosciences, Yokohama City University, 22-2 Seto, Kanazawa, Kanagawa, Yokohama 236-0027, Japan
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- Marie Kunihiro
- Department of Life and Environmental System Science, Graduate School of Nanobiosciences, Yokohama City University, 22-2 Seto, Kanazawa, Kanagawa, Yokohama 236-0027, Japan
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- Yasuhiro Ozeki
- Department of Life and Environmental System Science, Graduate School of Nanobiosciences, Yokohama City University, 22-2 Seto, Kanazawa, Kanagawa, Yokohama 236-0027, Japan
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- Yuichi Nogi
- Institute of Biogeosciences (Biogeos), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2–15 Natsushima-cho, Yokosuka 237-0061, Japan
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- Robert A. Kanaly
- Department of Life and Environmental System Science, Graduate School of Nanobiosciences, Yokohama City University, 22-2 Seto, Kanazawa, Kanagawa, Yokohama 236-0027, Japan
Description
<jats:p>A Gram-stain-negative, yellow, rod-shaped bacterium, designated strain KK22<jats:sup>T</jats:sup>, was isolated from a microbial consortium that grew on diesel fuel originally recovered from cattle pasture soil. Strain KK22<jats:sup>T</jats:sup>has been studied for its ability to biotransform high molecular weight polycyclic aromatic hydrocarbons. On the basis of 16S rRNA gene sequence phylogeny, strain KK22<jats:sup>T</jats:sup>was affiliated with the genus<jats:italic>Sphingobium</jats:italic>in the phylum<jats:italic>Proteobacteria</jats:italic>and was most closely related to<jats:italic>Sphingobium fuliginis</jats:italic>TKP<jats:sup>T</jats:sup>(99.8 %) and less closely related to<jats:italic>Sphingobium quisquiliarum</jats:italic>P25<jats:sup>T</jats:sup>(97.5 %). Results of DNA–DNA hybridization (DDH) revealed relatedness values between strain KK22<jats:sup>T</jats:sup>and strain TKP<jats:sup>T</jats:sup>and between strain KK22<jats:sup>T</jats:sup>and strain P25<jats:sup>T</jats:sup>of 21 ± 4 % (reciprocal hybridization, 27 ± 2 %) and 15 ± 2 % (reciprocal hybridization, 17 ± 1 %), respectively. Chemotaxonomic analyses of strain KK22<jats:sup>T</jats:sup>showed that the major respiratory quinone was ubiquinone Q-10, that the polar lipid profile consisted of phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidyl-<jats:italic>N</jats:italic>-methylethylethanolamine and sphingoglycolipid, and that C<jats:sub>18 : 1</jats:sub>ω7<jats:italic>c</jats:italic>and C<jats:sub>14 : 0</jats:sub>2-OH were the main fatty acid and hydroxylated fatty acids, respectively. This strain was unable to reduce nitrate and the genomic DNA G+C content was 64.7 mol%. Based upon the results of the DDH analyses, the fact that strain KK22<jats:sup>T</jats:sup>was motile, and its biochemical and physiological characteristics, strain KK22<jats:sup>T</jats:sup>could be separated from recognized species of the genus<jats:italic>Sphingobium</jats:italic>. We conclude that strain KK22<jats:sup>T</jats:sup>represents a novel species of this genus for which the name<jats:italic>Sphingobium barthaii</jats:italic>sp. nov. is proposed; the type strain is KK22<jats:sup>T</jats:sup>( = DSM 29313<jats:sup>T</jats:sup> = JCM 30309<jats:sup>T</jats:sup>).</jats:p>
Journal
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- International Journal of Systematic and Evolutionary Microbiology
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International Journal of Systematic and Evolutionary Microbiology 65 (Pt_9), 2919-2924, 2015-09-01
Microbiology Society
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Details 詳細情報について
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- CRID
- 1360002217780511744
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- ISSN
- 14665034
- 14665026
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- Data Source
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- Crossref
- KAKEN