Large-scale mapping of positional changes of hypoxia-responsive genes upon activation

  • Koh Nakayama
    Oxygen Biology Laboratory, Medical Research Institute, Tokyo Medical and Dental University (TMDU), Bunkyo-ku, Tokyo 113-8510, Japan
  • Sigal Shachar
    Cell Biology of Genomes Group, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892
  • Elizabeth H. Finn
    Cell Biology of Genomes Group, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892
  • Hiroyuki Sato
    Department of Clinical Biostatistics, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), Bunkyo-ku, Tokyo 113-8510, Japan
  • Akihiro Hirakawa
    Department of Clinical Biostatistics, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), Bunkyo-ku, Tokyo 113-8510, Japan
  • Tom Misteli
    Cell Biology of Genomes Group, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892

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<jats:p>A high-throughput imaging platform was used to perform a large-scale analysis of the spatial location of hypoxia-responsive genes. The location of some genes changed upon hypoxia; however, they did not correlate with the extent of their activation, indicating that gene positions and expression are not strictly linked in hypoxic gene activation.</jats:p>

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