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Proposal of one new family, seven new genera and seventy new basidiomycetous yeast species mostly isolated from Tibet and Yunnan provinces, China
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- Y.-L. Jiang
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- W.-J. Bao
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- F. Liu
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- G.-S. Wang
- Aquatic Science Institute, Tibet Academy of Agriculture and Animal Husbandry Science, Lhasa 850000, Tibet, China
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- A.M. Yurkov
- Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany
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- Q. Ma
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- Z.-D. Hu
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- X.-H. Chen
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- W.-N. Zhao
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- A.-H. Li
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
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- Q.-M. Wang
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, Hebei, China
Description
<jats:p>More than 2 000 yeast strains isolated from 1 200 samples mostly collected from Tibet and Yunnan provinces in China were identified as 462 species according to the internal transcribed spacer including the 5.8S rDNA (ITS) and the D1/D2 domains of the large subunit rDNA (LSU) sequence analyses. Among them, 70 new basidiomycetous yeast species were proposed based on the multi-locus phylogenetic analyses including the D1/D2 domains, the ITS, the small subunit rDNA (SSU), the largest subunit of RNA polymerase II (<jats:italic>RPB1</jats:italic>), the second largest subunit of RNA polymerase II (<jats:italic>RPB2</jats:italic>) and translation elongation factor 1-α (<jats:italic>TEF1</jats:italic>), as well as the phenotypic comparisons. The average nucleotide identity (ANI) analysis with the genomic metric was also used in the evaluation of the species delimitation for the genera<jats:italic> Holtermannia</jats:italic>,<jats:italic> Mrakia</jats:italic> and<jats:italic> Takashimella</jats:italic> that contain closely related species with low sequence heterogeneity in both ITS and D1/D2 regions. Forty-six new species belonged to 16 genera in the <jats:italic>Agaricomycotina</jats:italic>, 13 new species occurred in 12 genera in the <jats:italic>Pucciniomycotina</jats:italic>,<jats:italic> </jats:italic>three new species were distributed in three genera in the<jats:italic> Ustilaginomycotina, </jats:italic>and eight new species were classified in seven newly established genera. One new family was also proposed based on one of these new genera. The analyses revealed several inaccurate species names attributed to genomes deposited in GenBank, indicating the necessity of a more rigorous quality checks of the genomes deposited in the public databases.</jats:p>
Journal
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- Studies in Mycology
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Studies in Mycology 109 (1), 57-154, 2024-12-15
Westerdijk Fungal Biodiversity Institute
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Details 詳細情報について
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- CRID
- 1360022497407144448
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- ISSN
- 01660616
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- Data Source
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- Crossref