Genome Annotation and Curation Using MAKER and MAKER‐P

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  • Michael S. Campbell
    Eccles Institute of Human Genetics, University of Utah Salt Lake City Utah
  • Carson Holt
    Eccles Institute of Human Genetics, University of Utah Salt Lake City Utah
  • Barry Moore
    Eccles Institute of Human Genetics, University of Utah Salt Lake City Utah
  • Mark Yandell
    Eccles Institute of Human Genetics, University of Utah Salt Lake City Utah

Description

<jats:title>Abstract</jats:title><jats:p>This unit describes how to use the genome annotation and curation tools MAKER and MAKER‐P to annotate protein‐coding and noncoding RNA genes in newly assembled genomes, update/combine legacy annotations in light of new evidence, add quality metrics to annotations from other pipelines, and map existing annotations to a new assembly. MAKER and MAKER‐P can rapidly annotate genomes of any size, and scale to match available computational resources. © 2014 by John Wiley & Sons, Inc.</jats:p>

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