Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing
説明
<jats:title>Abstract</jats:title><jats:p>Advancing crop genomics requires efficient genetic systems enabled by high-quality personalized genome assemblies. Here, we introduce RagTag, a toolset for automating assembly scaffolding and patching, and we establish chromosome-scale reference genomes for the widely used tomato genotype M82 along with Sweet-100, a new rapid-cycling genotype that we developed to accelerate functional genomics and genome editing in tomato. This work outlines strategies to rapidly expand genetic systems and genomic resources in other plant species.</jats:p>
収録刊行物
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- Genome Biology
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Genome Biology 23 (1), 258-, 2022-12-15
Springer Science and Business Media LLC