Java Treeview—extensible visualization of microarray data

Alok J. Saldanha

doi:10.1093/bioinformatics/bth349

Java Treeview—extensible visualization of microarray data

DOI PDF 被引用文献106件

Alok J. Saldanha

Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA

この論文をさがす

CiNii Books

説明

<jats:title>Abstract</jats:title> <jats:p>Summary: Open source software encourages innovation by allowing users to extend the functionality of existing applications. Treeview is a popular application for the visualization of microarray data, but is closed-source and platform-specific, which limits both its current utility and suitability as a platform for further development. Java Treeview is an open-source, cross-platform rewrite that handles very large datasets well, and supports extensions to the file format that allow the results of additional analysis to be visualized and compared. The combination of a general file format and open source makes Java Treeview an attractive choice for solving a class of visualization problems. An applet version is also available that can be used on any website with no special server-side setup.</jats:p> <jats:p>Availability: http://jtreeview.sourceforge.net under GPL.</jats:p>