A widespread pathway for substitution of adenine by diaminopurine in phage genomes

  • Yan Zhou
    Tianjin Key Laboratory for Modern Drug Delivery and High-Efficiency, Collaborative Innovation Center of Chemical Science and Engineering, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China.
  • Xuexia Xu
    iHuman Institute, ShanghaiTech University, Shanghai 201210, China.
  • Yifeng Wei
    Singapore Institute of Food and Biotechnology Innovation, Agency for Science, Technology and Research (A*STAR), Singapore.
  • Yu Cheng
    iHuman Institute, ShanghaiTech University, Shanghai 201210, China.
  • Yu Guo
    iHuman Institute, ShanghaiTech University, Shanghai 201210, China.
  • Ivan Khudyakov
    All-Russian Research Institute for Agricultural Microbiology, St. Petersburg 196608, Russia.
  • Fuli Liu
    Department of Medical Microbiology and Immunology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
  • Ping He
    Department of Medical Microbiology and Immunology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
  • Zhangyue Song
    Biomedical Big Data Platform, SIAIS, ShanghaiTech University, Shanghai 201210, China.
  • Zhi Li
    Tianjin Key Laboratory for Modern Drug Delivery and High-Efficiency, Collaborative Innovation Center of Chemical Science and Engineering, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China.
  • Yan Gao
    Tianjin Key Laboratory for Modern Drug Delivery and High-Efficiency, Collaborative Innovation Center of Chemical Science and Engineering, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China.
  • Ee Lui Ang
    Singapore Institute of Food and Biotechnology Innovation, Agency for Science, Technology and Research (A*STAR), Singapore.
  • Huimin Zhao
    Singapore Institute of Food and Biotechnology Innovation, Agency for Science, Technology and Research (A*STAR), Singapore.
  • Yan Zhang
    Tianjin Key Laboratory for Modern Drug Delivery and High-Efficiency, Collaborative Innovation Center of Chemical Science and Engineering, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin 300072, China.
  • Suwen Zhao
    iHuman Institute, ShanghaiTech University, Shanghai 201210, China.

Description

<jats:title>Biosynthesis and replication, from A to Z</jats:title> <jats:p> Four nucleobases. adenine (A), cytosine (C), guanine (G), and thymine (T), are usually thought to be invariable in DNA. In bacterial viruses, however, each of the DNA bases have variations that help them to escape degradation by bacterial restriction enzymes. In the genome of cyanophage S-2L, A is completely replaced by diaminopurine (Z), which forms three hydrogen bonds with T and thus creates non–Watson-Crick base pairing in the DNA of this virus (see the Perspective by Grome and Isaacs). Zhou <jats:italic>et al.</jats:italic> and Sleiman <jats:italic>et al.</jats:italic> determined the biochemical pathway that produces Z, which revealed more Z genomes in viruses hosted in bacteria distributed widely in the environment and phylogeny. Pezo <jats:italic>et al.</jats:italic> identified a DNA polymerase that incorporates Z into DNA while rejecting A. These findings enrich our understanding of biodiversity and expand the genetic palette for synthetic biology. </jats:p> <jats:p> <jats:italic>Science</jats:italic> , this issue p. <jats:related-article issue="6541" page="512" related-article-type="in-this-issue" vol="372">512</jats:related-article> , <jats:related-article issue="6541" page="516" related-article-type="in-this-issue" vol="372">516</jats:related-article> , <jats:related-article issue="6541" page="520" related-article-type="in-this-issue" vol="372">520</jats:related-article> ; see also p. <jats:related-article issue="6541" page="460" related-article-type="in-this-issue" vol="372">460</jats:related-article> </jats:p>

Journal

  • Science

    Science 372 (6541), 512-516, 2021-04-30

    American Association for the Advancement of Science (AAAS)

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