Rare coding variation provides insight into the genetic architecture and phenotypic context of autism
書誌事項
- 公開日
- 2022-08-18
- 権利情報
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- https://www.springer.com/tdm
- https://www.springer.com/tdm
- DOI
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- 10.1038/s41588-022-01104-0
- 公開者
- Springer Science and Business Media LLC
この論文をさがす
説明
Some individuals with autism spectrum disorder (ASD) carry functional mutations rarely observed in the general population. We explored the genes disrupted by these variants from joint analysis of protein-truncating variants (PTVs), missense variants and copy number variants (CNVs) in a cohort of 63,237 individuals. We discovered 72 genes associated with ASD at false discovery rate (FDR) ≤ 0.001 (185 at FDR ≤ 0.05). De novo PTVs, damaging missense variants and CNVs represented 57.5%, 21.1% and 8.44% of association evidence, while CNVs conferred greatest relative risk. Meta-analysis with cohorts ascertained for developmental delay (DD) (n = 91,605) yielded 373 genes associated with ASD/DD at FDR ≤ 0.001 (664 at FDR ≤ 0.05), some of which differed in relative frequency of mutation between ASD and DD cohorts. The DD-associated genes were enriched in transcriptomes of progenitor and immature neuronal cells, whereas genes showing stronger evidence in ASD were more enriched in maturing neurons and overlapped with schizophrenia-associated genes, emphasizing that these neuropsychiatric disorders may share common pathways to risk.
収録刊行物
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- Nature Genetics
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Nature Genetics 54 (9), 1320-1331, 2022-08-18
Springer Science and Business Media LLC
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キーワード
- 3102 Bioinformatics and computational biology (for-2020)
- Broad Institute Center for Common Disease Genomics
- Autism Sequencing Consortium
- 3001 Agricultural biotechnology (for-2020)
- Autism Spectrum Disorder
- Autism
- 3102 Bioinformatics and Computational Biology (for-2020)
- iPSYCH-BROAD Consortium
- 11 Medical and Health Sciences (for)
- Medical and Health Sciences
- 3105 Genetics (for-2020)
- Clinical Research (rcdc)
- Brain Disorders (rcdc)
- Autism (rcdc)
- 2.1 Biological and endogenous factors
- DNA Copy Number Variations (mesh)
- Intellectual and Developmental Disabilities (IDD) (rcdc)
- Broad Institute Center for Common Disease Genomics (Broad-CCDG)
- Neurosciences (rcdc)
- Genetic Predisposition to Disease (mesh)
- DNA Copy Number Variation
- Developmental Biology (science-metrix)
- Pediatric
- Humans (mesh)
- Autism Spectrum Disorder (mesh)
- Mutation (mesh)
- Neurodevelopmental disorders
- Autism Spectrum Disorder; Autistic Disorder; DNA Copy Number Variations; Genetic Predisposition to Disease; Humans; Mutation
- Biological Sciences
- Autism spectrum disorders
- Mental Illness
- 06 Biological Sciences (for)
- Mental Health
- Human
- Mental Health (rcdc)
- Mental Illness (rcdc)
- DNA Copy Number Variations
- Intellectual and Developmental Disabilities (IDD)
- Agricultural biotechnology
- Bioinformatics and Computational Biology
- 610
- autism spectrum disorders; disease gene; copy number variants; neuropsychiatric disorders
- [SDV.GEN.GH] Life Sciences [q-bio]/Genetics/Human genetics
- Clinical Research
- Autism Sequencing Consortium (ASC)
- Genetics
- Humans
- Genetic Predisposition to Disease
- Autistic Disorder
- Pediatric (rcdc)
- Schizophrenia (rcdc)
- Autistic Disorder (mesh)
- Genetic association study
- 31 Biological Sciences (for-2020)
- Genetics (rcdc)
- Human Genome
- Neurosciences
- [SDV.NEU.NB] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Neurobiology
- 2.1 Biological and endogenous factors (hrcs-rac)
- Stem Cell Research
- Stem Cell Research (rcdc)
- Human Genome (rcdc)
- Brain Disorders
- Mental health (hrcs-hc)
- Mutation
- Schizophrenia
- DNA Copy Number Variations; Genetic Predisposition to Disease; Humans; Mutation; Autism Spectrum Disorder; Autistic Disorder
- Gene expression
- Developmental Biology
詳細情報 詳細情報について
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- CRID
- 1360861711907600000
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- ISSN
- 15461718
- 10614036
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- PubMed
- 35982160
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- データソース種別
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- Crossref
- OpenAIRE