tRNA Modification Profiles and Codon-Decoding Strategies in Methanocaldococcus jannaschii
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- Ningxi Yu
- Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, Ohio, USA
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- Manasses Jora
- Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, Ohio, USA
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- Beulah Solivio
- Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, Ohio, USA
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- Priti Thakur
- Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, Ohio, USA
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- Carlos G. Acevedo-Rocha
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
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- Lennart Randau
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
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- Valérie de Crécy-Lagard
- Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, Florida, USA
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- Balasubrahmanyam Addepalli
- Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, Ohio, USA
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- Patrick A. Limbach
- Rieveschl Laboratories for Mass Spectrometry, Department of Chemistry, University of Cincinnati, Cincinnati, Ohio, USA
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- Tina M. Henkin
- editor
説明
<jats:p> While many posttranscriptional modifications in <jats:named-content content-type="genus-species">M. jannaschii</jats:named-content> tRNAs are also found in bacteria and eukaryotes, several that are unique to archaea were identified. By RNA modification mapping, the modification profiles of <jats:named-content content-type="genus-species">M. jannaschii</jats:named-content> tRNA anticodon loops were characterized, allowing a comparative analysis with <jats:named-content content-type="genus-species">H. volcanii</jats:named-content> modification profiles as well as a general comparison with bacterial and eukaryotic decoding strategies. This general comparison reveals that <jats:named-content content-type="genus-species">M. jannaschii</jats:named-content> , like <jats:named-content content-type="genus-species">H. volcanii</jats:named-content> , follows codon-decoding strategies similar to those used by bacteria, although position 37 appears to be modified to a greater extent than seen in <jats:named-content content-type="genus-species">H. volcanii</jats:named-content> . </jats:p>
収録刊行物
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- Journal of Bacteriology
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Journal of Bacteriology 201 (9), e00690-, 2019-05
American Society for Microbiology