Phylotranscriptomic analysis of the origin and early diversification of land plants
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- Norman J. Wickett
- Chicago Botanic Garden, Glencoe, IL 60022;
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- Siavash Mirarab
- Department of Computer Science, University of Texas, Austin, TX 78712;
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- Nam Nguyen
- Department of Computer Science, University of Texas, Austin, TX 78712;
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- Tandy Warnow
- Department of Computer Science, University of Texas, Austin, TX 78712;
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- Eric Carpenter
- Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9;
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- Naim Matasci
- iPlant Collaborative, Tucson, AZ 85721;
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- Saravanaraj Ayyampalayam
- Department of Plant Biology, University of Georgia, Athens, GA 30602;
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- Michael S. Barker
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721;
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- J. Gordon Burleigh
- Department of Biology and
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- Matthew A. Gitzendanner
- Department of Biology and
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- Brad R. Ruhfel
- Department of Biology and
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- Eric Wafula
- Department of Biology, Pennsylvania State University, University Park, PA 16803;
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- Joshua P. Der
- Department of Biology, Pennsylvania State University, University Park, PA 16803;
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- Sean W. Graham
- Department of Botany and
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- Sarah Mathews
- Arnold Arboretum of Harvard University, Cambridge, MA 02138;
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- Michael Melkonian
- Botanical Institute, Universität zu Köln, Cologne D-50674, Germany;
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- Douglas E. Soltis
- Department of Biology and
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- Pamela S. Soltis
- Department of Biology and
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- Nicholas W. Miles
- Florida Museum of Natural History, Gainesville, FL 32611;
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- Carl J. Rothfels
- Department of Zoology, University of British Columbia, Vancouver, BC, Canada V6T 1Z4;
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- Lisa Pokorny
- Department of Biology, Duke University, Durham, NC 27708;
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- A. Jonathan Shaw
- Department of Biology, Duke University, Durham, NC 27708;
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- Lisa DeGironimo
- New York Botanical Garden, Bronx, NY 10458;
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- Dennis W. Stevenson
- New York Botanical Garden, Bronx, NY 10458;
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- Barbara Surek
- Botanical Institute, Universität zu Köln, Cologne D-50674, Germany;
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- Juan Carlos Villarreal
- Department fur Biologie, Systematische Botanik und Mykologie, Ludwig-Maximilians-Universitat, 80638 Munich, Germany;
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- Béatrice Roure
- Département de Biochimie, Centre Robert-Cedergren, Université de Montréal, Succursale Centre-Ville, Montreal, QC, Canada H3C 3J7;
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- Hervé Philippe
- Département de Biochimie, Centre Robert-Cedergren, Université de Montréal, Succursale Centre-Ville, Montreal, QC, Canada H3C 3J7;
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- Claude W. dePamphilis
- Department of Biology, Pennsylvania State University, University Park, PA 16803;
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- Tao Chen
- Shenzhen Fairy Lake Botanical Garden, The Chinese Academy of Sciences, Shenzhen, Guangdong 518004, China;
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- Michael K. Deyholos
- Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9;
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- Regina S. Baucom
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109;
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- Toni M. Kutchan
- Donald Danforth Plant Science Center, St. Louis, MO 63132;
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- Megan M. Augustin
- Donald Danforth Plant Science Center, St. Louis, MO 63132;
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- Jun Wang
- BGI-Shenzhen, Bei shan Industrial Zone, Yantian District, Shenzhen 518083, China; and
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- Yong Zhang
- CNRS, Station d’ Ecologie Expérimentale du CNRS, Moulis, 09200, France;
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- Zhijian Tian
- BGI-Shenzhen, Bei shan Industrial Zone, Yantian District, Shenzhen 518083, China; and
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- Zhixiang Yan
- BGI-Shenzhen, Bei shan Industrial Zone, Yantian District, Shenzhen 518083, China; and
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- Xiaolei Wu
- BGI-Shenzhen, Bei shan Industrial Zone, Yantian District, Shenzhen 518083, China; and
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- Xiao Sun
- BGI-Shenzhen, Bei shan Industrial Zone, Yantian District, Shenzhen 518083, China; and
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- Gane Ka-Shu Wong
- Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9;
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- James Leebens-Mack
- Department of Plant Biology, University of Georgia, Athens, GA 30602;
書誌事項
- 公開日
- 2014-10-29
- DOI
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- 10.1073/pnas.1323926111
- 公開者
- Proceedings of the National Academy of Sciences
この論文をさがす
説明
<jats:title>Significance</jats:title> <jats:p>Early branching events in the diversification of land plants and closely related algal lineages remain fundamental and unresolved questions in plant evolutionary biology. Accurate reconstructions of these relationships are critical for testing hypotheses of character evolution: for example, the origins of the embryo, vascular tissue, seeds, and flowers. We investigated relationships among streptophyte algae and land plants using the largest set of nuclear genes that has been applied to this problem to date. Hypothesized relationships were rigorously tested through a series of analyses to assess systematic errors in phylogenetic inference caused by sampling artifacts and model misspecification. Results support some generally accepted phylogenetic hypotheses, while rejecting others. This work provides a new framework for studies of land plant evolution.</jats:p>
収録刊行物
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- Proceedings of the National Academy of Sciences
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Proceedings of the National Academy of Sciences 111 (45), E4859-, 2014-10-29
Proceedings of the National Academy of Sciences