ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models
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- Diego Darriba
- Computer Architecture Group, Centro de investigación CITIC, Universidade da Coruña, Elviña, A Coruña, Spain
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- David Posada
- Department of Biochemistry, Genetics, and Immunology, University of Vigo, Vigo, Spain
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- Alexey M Kozlov
- Computational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, Germany
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- Alexandros Stamatakis
- Computational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, Germany
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- Benoit Morel
- Computational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, Germany
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- Tomas Flouri
- Department of Genetics, Evolution and Environment, University College London, London, United Kingdom
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- Keith Crandall
- editor
説明
<jats:title>Abstract</jats:title><jats:p>ModelTest-NG is a reimplementation from scratch of jModelTest and ProtTest, two popular tools for selecting the best-fit nucleotide and amino acid substitution models, respectively. ModelTest-NG is one to two orders of magnitude faster than jModelTest and ProtTest but equally accurate and introduces several new features, such as ascertainment bias correction, mixture, and free-rate models, or the automatic processing of single partitions. ModelTest-NG is available under a GNU GPL3 license at https://github.com/ddarriba/modeltest , last accessed September 2, 2019.</jats:p>
収録刊行物
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- Molecular Biology and Evolution
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Molecular Biology and Evolution 37 (1), 291-294, 2019-08-21
Oxford University Press (OUP)
