Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates
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- Michael Feldgarden
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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- Vyacheslav Brover
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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- Daniel H. Haft
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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- Arjun B. Prasad
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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- Douglas J. Slotta
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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- Igor Tolstoy
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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- Gregory H. Tyson
- Food and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, Maryland, USA
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- Shaohua Zhao
- Food and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, Maryland, USA
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- Chih-Hao Hsu
- Food and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, Maryland, USA
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- Patrick F. McDermott
- Food and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, Maryland, USA
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- Daniel A. Tadesse
- Food and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, Maryland, USA
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- Cesar Morales
- USDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, Georgia, USA
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- Mustafa Simmons
- USDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, Georgia, USA
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- Glenn Tillman
- USDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, Georgia, USA
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- Jamie Wasilenko
- USDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, Georgia, USA
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- Jason P. Folster
- Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
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- William Klimke
- National Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA
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説明
<jats:p>Antimicrobial resistance (AMR) is a major public health problem that requires publicly available tools for rapid analysis. To identify AMR genes in whole-genome sequences, the National Center for Biotechnology Information (NCBI) has produced AMRFinder, a tool that identifies AMR genes using a high-quality curated AMR gene reference database.</jats:p>
収録刊行物
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- Antimicrobial Agents and Chemotherapy
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Antimicrobial Agents and Chemotherapy 63 (11), e00483-, 2019-11
American Society for Microbiology