A Large-Scale Multi-ancestry Genome-wide Study Accounting for Smoking Behavior Identifies Multiple Significant Loci for Blood Pressure
書誌事項
- 公開日
- 2018-03
- 権利情報
-
- https://www.elsevier.com/tdm/userlicense/1.0/
- https://www.elsevier.com/legal/tdmrep-license
- http://www.elsevier.com/open-access/userlicense/1.0/
- DOI
-
- 10.1016/j.ajhg.2018.01.015
- 10.17863/cam.25222
- 公開者
- Elsevier BV
この論文をさがす
説明
Genome-wide association analysis advanced understanding of blood pressure (BP), a major risk factor for vascular conditions such as coronary heart disease and stroke. Accounting for smoking behavior may help identify BP loci and extend our knowledge of its genetic architecture. We performed genome-wide association meta-analyses of systolic and diastolic BP incorporating gene-smoking interactions in 610,091 individuals. Stage 1 analysis examined ∼18.8 million SNPs and small insertion/deletion variants in 129,913 individuals from four ancestries (European, African, Asian, and Hispanic) with follow-up analysis of promising variants in 480,178 additional individuals from five ancestries. We identified 15 loci that were genome-wide significant (p < 5 × 10-8) in stage 1 and formally replicated in stage 2. A combined stage 1 and 2 meta-analysis identified 66 additional genome-wide significant loci (13, 35, and 18 loci in European, African, and trans-ancestry, respectively). A total of 56 known BP loci were also identified by our results (p < 5 × 10-8). Of the newly identified loci, ten showed significant interaction with smoking status, but none of them were replicated in stage 2. Several loci were identified in African ancestry, highlighting the importance of genetic studies in diverse populations. The identified loci show strong evidence for regulatory features and support shared pathophysiology with cardiometabolic and addiction traits. They also highlight a role in BP regulation for biological candidates such as modulators of vascular structure and function (CDKN1B, BCAR1-CFDP1, PXDN, EEA1), ciliopathies (SDCCAG8, RPGRIP1L), telomere maintenance (TNKS, PINX1, AKTIP), and central dopaminergic signaling (MSRA, EBF2).
収録刊行物
-
- The American Journal of Human Genetics
-
The American Journal of Human Genetics 102 (3), 375-400, 2018-03
Elsevier BV
関連未分類成果物
- Tweet
キーワード
- Male
- Smoking/genetics
- multi-ancestry
- Continental Population Groups/genetics
- Blood Pressure
- INTIMA-MEDIA THICKNESS
- DISEASE
- Cohort Studies
- Diastole
- GWAS
- GENE-ENVIRONMENT INTERACTION
- Genetics (clinical)
- INSULIN-RESISTANCE
- Continental Population Groups
- Multi-ancestry
- JOINT
- Smoking
- COMMON VARIANTS
- blood pressure
- Single Nucleotide
- GxE interaction
- Diastole/genetics
- FALSE DISCOVERY RATE
- [SDV] Life Sciences [q-bio]
- name=Genetics(clinical)
- Genetics, developmental biology, physiology
- OBESITY
- Blood pressure
- CORONARY-ARTERY-DISEASE
- Female
- Single Nucleotide/genetics
- Systole/genetics
- GENE-ENVIRONMENT INTERACTION ; INTIMA-MEDIA THICKNESS ; FALSE DISCOVERY RATE ; BODY-MASS INDEX ; ASSOCIATION ANALYSIS ; COMMON VARIANTS ; METAANALYSIS ; DISEASE ; OBESITY ; JOINT
- lifestyle
- /dk/atira/pure/subjectarea/asjc/1300/1311
- 572
- Blood Pressure/genetics
- SUSCEPTIBILITY LOCI
- EMC NIHES-01-64-02
- Systole
- name=Genetics
- Quantitative Trait Loci
- 610
- Polymorphism, Single Nucleotide
- GxE interactions
- smoking
- Genetic
- 616
- Journal Article
- Humans
- Polymorphism
- METAANALYSIS
- blood pressure; GWAS; GxE interactions; lifestyle; multi-ancestry; smoking; Genetics; Genetics (clinical)
- ALCOHOL DEPENDENCE
- Racial Groups
- Reproducibility of Results
- /dk/atira/pure/subjectarea/asjc/2700/2716
- Epistasis, Genetic
- ta3121
- Lifestyle
- NICOTINE DEPENDENCE
- BODY-MASS INDEX
- Biomedicine
- ASSOCIATION ANALYSIS
- [SDV.SPEE] Life Sciences [q-bio]/Santé publique et épidémiologie
- Genetic Loci
- Epistasis
- Quantitative Trait Loci/genetics
- Genome-Wide Association Study
詳細情報 詳細情報について
-
- CRID
- 1363670321198121600
-
- ISSN
- 00029297
-
- PubMed
- 29455858
-
- データソース種別
-
- Crossref
- OpenAIRE
- IRDB