AtCIPK8, a CBL‐interacting protein kinase, regulates the low‐affinity phase of the primary nitrate response

<jats:title>Summary</jats:title><jats:p>Nitrate, the major nitrogen source for most plants, is not only a nutrient but also a signaling molecule. For almost two decades, it has been known that nitrate can rapidly induce transcriptional expression of several nitrate‐related genes, a process that is referred to as the primary nitrate response. However, little is known about how plants actually sense nitrate and how the signal is transmitted in this pathway. In this study, a calcineurin B‐like (CBL) ‐interacting protein kinase (CIPK) gene, <jats:italic>CIPK8</jats:italic>, was found to be involved in early nitrate signaling. <jats:italic>CIPK8</jats:italic> expression was rapidly induced by nitrate. Analysis of two independent knockout mutants and a complemented line showed that CIPK8 positively regulates the nitrate‐induced expression of primary nitrate response genes, including nitrate transporter genes and genes required for assimilation. Kinetic analysis of nitrate induction levels of these genes in wild‐type plants indicated that there are two response phases: a high‐affinity phase with a <jats:italic>K</jats:italic><jats:sub>m</jats:sub> of approximately 30 μ<jats:sc>m</jats:sc> and a low‐affinity phase with a <jats:italic>K</jats:italic><jats:sub>m</jats:sub> of approximately 0.9 m<jats:sc>m</jats:sc>. As <jats:italic>cipk8</jats:italic> mutants were defective mainly in the low‐affinity response, the high‐affinity and low‐affinity nitrate signaling systems are proposed to be genetically distinct, with CIPK8 involved in the low‐affinity system. In addition, CIPK8 was found to be involved in long‐term nitrate‐modulated primary root growth and nitrate‐modulated expression of a vacuolar malate transporter. Taken together, our results indicate that CBL–CIPK networks are responsible not only for stress responses and potassium shortage, but also for nitrate sensing.</jats:p>