DNA-sequence-based species delimitation for larval chironomid samples collected from Japanese farm ponds
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- TAKAMURA Kenzi
- National Institute for Environmental Studies
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- UENO Ryuhei
- National Institute for Environmental Studies
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- KONDO Natsuko I.
- National Institute for Environmental Studies
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- OHBAYASHI Kako
- National Institute for Environmental Studies Graduate School of Arts and Sciences, University of Tokyo
Bibliographic Information
- Other Title
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- ため池ユスリカ幼虫標本をDNA配列から種に区分する
Abstract
<p> DNA-sequence-based species delimitation methods were applied to larval chironomid samples collected from 20 Japanese farm ponds. This is the first trial using DNA barcoding to reveal the species composition of chironomid communites in limnological waters. A total of 72 species were delimited from mitochondria DNA cytochrome c oxidase I sequences of the samples. Of these, the number of species delimited from the total sample, bottom sediment sample, and aquatic weed sample of each pond, were 0-21, 0-15 and 3-16, respectively. Greater numbers of collected larvae resulted in more delimited species. Scientific names were assigned for 31 species.</p>
Journal
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- Japanese Journal of Limnology (Rikusuigaku Zasshi)
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Japanese Journal of Limnology (Rikusuigaku Zasshi) 78 (1), 35-43, 2016
The Japanese Society of Limnology
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Keywords
Details 詳細情報について
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- CRID
- 1390001204062818944
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- NII Article ID
- 130006405176
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- ISSN
- 18824897
- 00215104
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- Text Lang
- ja
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- Data Source
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- JaLC
- Crossref
- CiNii Articles
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- Abstract License Flag
- Disallowed