Evaluation of Gene Index for Identification of Byssochlamys spp.
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- WATANABE Maiko
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
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- KATO Yuko
- Food Research Laboratories, Mitsui Norin Co., Ltd.
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- TOGAMI Keiko
- Safety Science Institute, Suntory Ltd.
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- YAMANAKA Mikiko
- Safety Science Institute, Suntory Ltd.
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- WAKABAYASHI Keiko
- Food Research Laboratories, Mitsui Norin Co., Ltd.
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- OGAWA Hiroyuki
- Food Research Laboratories, Mitsui Norin Co., Ltd.
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- WASADA Yuko
- Food Research Laboratories, Mitsui Norin Co., Ltd.
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- GOTO Keiichi
- Food Research Laboratories, Mitsui Norin Co., Ltd.
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- HARA-KUDO Yukiko
- Division of Microbiology, National Institute of Health Sciences
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- AMANO Norihide
- Safety Science Institute, Suntory Ltd.
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- YOKOTA Akira
- Institute of Molecular and Cellular Biosciences, The University of Tokyo
Bibliographic Information
- Other Title
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- Byssochlamys spp.同定のための遺伝子指標の評価
- Byssochlamys spp ドウテイ ノ タメノ イデンシ シヒョウ ノ ヒョウカ
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Description
Comparative sequence analysis was performed on the 18S rRNA gene (1,676 bp), 26/28S rRNA gene D2 region (321 bp) and lys2 (997 bp) to evaluate the gene index for rapid, accurate and convenient identification of Byssochlamys spp. and related species. The results showed that 26 strains (11 species) of the clade could be identified or grouped by means of each gene sequence. The highest resolution to discriminate these species was observed with lys2, but 26/28S rRNA gene D2 region was considered to be the best index for convenient identification. In addition, phylogenetic analysis based on these genes indicated that genus Byssochlamys is not monophyletic, although species in the clade are closely related to each other. Re-classification will be necessary, based on detailed morphological observations.
Journal
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- Food Hygiene and Safety Science (Shokuhin Eiseigaku Zasshi)
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Food Hygiene and Safety Science (Shokuhin Eiseigaku Zasshi) 49 (2), 82-87, 2008
Japanese Society for Food Hygiene and Safety
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Details 詳細情報について
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- CRID
- 1390001204224252544
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- NII Article ID
- 10024335348
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- NII Book ID
- AN00117741
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- COI
- 1:CAS:528:DC%2BD1cXntVGgtbk%3D
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- ISSN
- 18821006
- 00156426
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- NDL BIB ID
- 9509468
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- PubMed
- 18503243
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- Text Lang
- ja
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- Data Source
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- JaLC
- IRDB
- NDL
- Crossref
- PubMed
- CiNii Articles
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- Abstract License Flag
- Disallowed