Implementation and Evaluation of Free Format Database System for Diversified Biological Information and its Relatives

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  • Ma Juncai
    Information Network Center, Institute of Microbiology, Chinese Academy of Sciences
  • Hatano Shoji
    Information Network Center, Institute of Microbiology, Chinese Academy of Sciences
  • Ichiyanagi Yoshihiro
    Information Network Center, Institute of Microbiology, Chinese Academy of Sciences

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  • 多様な生物関連情報を格納するためのフリーフォーマットデータベースシステムの実装と評価
  • タヨウ ナ セイブツ カンレン ジョウホウ オ カクノウ スル タメ ノ フリーフォーマット データベース システム ノ ジッソウ ト ヒョウカ

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Abstract

Information handled in biology and agriculture is very complex and various. In the field of application, more diverse information is temporarily and informally generated. Then different kind of information is handled in different database for different purpose so far. On the other hand, we are facing global problems, such as those of food supply, those of environment, etc, which require interdisciplinary research to resolve. Thus it is useful to build a general database which can handle any kind of biological data and its relatives. Therefore we have developed a free format database where we can define each format for each record. The system has been faster than several XML databases tested and we can control access limitation to any values of any attributes on any records. Then we designed a Web-interface to the system and it has actually worked well with biological resource information in our laboratory.

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