Development and characterization of 14 microsatellite markers for <i>Buergeria japonica</i> (Amphibia, Anura, Rhacophoridae)
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- Komaki Shohei
- Institute for Amphibian Biology, Graduate School of Science, Hiroshima University
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- Igawa Takeshi
- Institute for Amphibian Biology, Graduate School of Science, Hiroshima University
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- Nozawa Masafumi
- Center for Information Biology, National Institute of Genetics Department of Genetics, SOKENDAI
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- Lin Si-Min
- Department of Life Science, National Taiwan Normal University
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- Oumi Shohei
- Section of Agriculture and Forest, Amami City Government
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- Sumida Masayuki
- Institute for Amphibian Biology, Graduate School of Science, Hiroshima University
Bibliographic Information
- Other Title
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- Development and characterization of 14 microsatellite markers for Buergeria japonica (Amphibia, Anura, Rhacophoridae)
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Abstract
Buergeria japonica is a common frog species distributed throughout almost all islands in Ryukyu Archipelago. Because of their exceptionally wide distribution and higher physiological tolerance comparing to the other anurans, their demographic history and formation of distribution are intrinsic topics in the herpetological fauna of Ryukyu. Microsatellite marker is ideal genetic marker for such studies at inter- and intra-population level. We therefore developed microsatellite markers of B. japonica utilizing Ion PGM™ sequencing. As a result of the screening, we developed a total of 14 polymorphic markers. To test availabilities of these markers, we genotyped four island populations. The total number of alleles and expected hetelozygosities per locus ranged from 4 to 21 and 0.00 to 0.864, respectively. The phylogenetic relationship among the four populations based on the genetic distances of these markers was congruent with general divergence pattern of amphibians and reptiles in Ryukyu area. These markers developed in this study are considered to be useful for future studies about phylogeography and demography of this species.
Journal
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- Genes & Genetic Systems
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Genes & Genetic Systems 89 (1), 35-39, 2014
The Genetics Society of Japan
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Details 詳細情報について
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- CRID
- 1390282680449210752
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- NII Article ID
- 130004137821
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- NII Book ID
- AA11077421
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- COI
- 1:STN:280:DC%2BC2cjhvVGntw%3D%3D
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- ISSN
- 18805779
- 13417568
- http://id.crossref.org/issn/13417568
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- NDL BIB ID
- 025424945
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- PubMed
- 24817760
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- Text Lang
- en
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- Data Source
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- JaLC
- IRDB
- NDL
- Crossref
- PubMed
- CiNii Articles
- KAKEN
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- Abstract License Flag
- Disallowed