Coexpression analysis of the cell wall formation-related genes with <I>Arabidopsis thaliana</I> microarray data sets

DOI
  • Ohno Takashi
    The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
  • Ogata Yoshiyuki
    The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
  • Sakurai Nozomu
    The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
  • Aoki Koh
    The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
  • Suzuki Hideyuki
    The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
  • Saito kazuki
    Graduate School of Pharmaceutical Sciences, Chiba Univ.
  • Shibata Daisuke
    The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.

Bibliographic Information

Other Title
  • シロイヌナズナ遺伝子発現相関を利用した細胞壁形成関連遺伝子のネットワーク解析

Abstract

Cellulose, a major component of the cell walls, is the most abundant biopolymer in plants and serves many uses as industrial materials. However, the cellulose synthesis is so complicated that the mechanisms are poorly understood. In the present study, we analyzed a comprehensive gene coexpression profiles of the cell wall formation-related genes based on the publicly available microarray data sets from RIKEN and the Max Planck Institute.<br>The cellulose synthase genes (CesA) involved in primary and secondary cell wall formation were classified into two separate groups. In these groups, genes that have been previously shown to participate in cell wall formation, such as COBRA and chitinase-like protein gene, were correlated with CesA. Additionally, CesA also correlated with genes encoding enzymes and transcription factors that have been uncharacterized so far. These genes may participate in and play distinct roles in the formation of primary and secondary cell wall.

Journal

Details 詳細情報について

  • CRID
    1390282680605605120
  • NII Article ID
    130006989231
  • DOI
    10.14841/jspp.2006.0.107.0
  • Data Source
    • JaLC
    • CiNii Articles
  • Abstract License Flag
    Disallowed

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