Coexpression analysis of the cell wall formation-related genes with <I>Arabidopsis thaliana</I> microarray data sets
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- Ohno Takashi
- The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
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- Ogata Yoshiyuki
- The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
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- Sakurai Nozomu
- The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
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- Aoki Koh
- The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
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- Suzuki Hideyuki
- The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
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- Saito kazuki
- Graduate School of Pharmaceutical Sciences, Chiba Univ.
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- Shibata Daisuke
- The NEDO Team of Applied Plant Genomics, Kazusa DNA Res. Inst.
Bibliographic Information
- Other Title
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- シロイヌナズナ遺伝子発現相関を利用した細胞壁形成関連遺伝子のネットワーク解析
Abstract
Cellulose, a major component of the cell walls, is the most abundant biopolymer in plants and serves many uses as industrial materials. However, the cellulose synthesis is so complicated that the mechanisms are poorly understood. In the present study, we analyzed a comprehensive gene coexpression profiles of the cell wall formation-related genes based on the publicly available microarray data sets from RIKEN and the Max Planck Institute.<br>The cellulose synthase genes (CesA) involved in primary and secondary cell wall formation were classified into two separate groups. In these groups, genes that have been previously shown to participate in cell wall formation, such as COBRA and chitinase-like protein gene, were correlated with CesA. Additionally, CesA also correlated with genes encoding enzymes and transcription factors that have been uncharacterized so far. These genes may participate in and play distinct roles in the formation of primary and secondary cell wall.
Journal
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- Plant and Cell Physiology Supplement
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Plant and Cell Physiology Supplement 2006 (0), 107-107, 2006
The Japanese Society of Plant Physiologists
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Details 詳細情報について
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- CRID
- 1390282680605605120
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- NII Article ID
- 130006989231
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- Data Source
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- JaLC
- CiNii Articles
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- Abstract License Flag
- Disallowed