Identification of the Key Genes of Immune Infiltration in Dilated Cardiomyopathy

  • Qi Bin
    Department of Cardiology, First Affiliated Hospital, Guangxi Medical University
  • Wang Hai-Yan
    Department of Cardiology, First Affiliated Hospital, Guangxi Medical University
  • Ma Xiao
    Department of Cardiology, First Affiliated Hospital, Guangxi Medical University
  • Chi Yu-Feng
    Department of Cardiology, First Affiliated Hospital, Guangxi Medical University
  • Gui Chun
    Department of Cardiology, First Affiliated Hospital, Guangxi Medical University

抄録

<p>Dilated cardiomyopathy (DCM) is a common cause of heart failure. In this study, we screened the immune infiltration-related genes associated with DCM to explore the potential molecular mechanisms and provide a basis for the early diagnosis and development of new immunotherapeutic targets. A dataset related to DCM was downloaded from the Gene Expression Omnibus (GEO) database. R software was applied to the genetic differential analysis of patients with DCM and healthy individuals, and the obtained differential expressed genes (DEGs) were screened for differentially expressed immune-related genes (DEIRGs) after comparison with the immune microsatellite database. Gene functional analysis established a protein interaction network (PPI). The immune infiltration in patients with DCM versus normal controls was assessed using the CIBERSORT algorithm, the hub genes were screened using the MOCDE app, and the hubs were validated in multiple datasets. A total of 246 DEGs were screened (adj. P < 0.05 and |logFC| > 0.3), and a total of 170 DEIRGs were compared. Gene Ontology analysis showed significant (adj. P < 0.05) Biological Process entries of 591, Cellular Component of 10, and Molecular Function of 39; Kyoto Encyclopedia of Genes and Genomes showed 20 significant entries, mainly focused on cytokines involved in immune-related response, etc. A protein interaction network comprising 28 hub DEGs was constructed in combination with the PPI network interactions. DEIRG was mainly distributed in the T-cell receptor pathway by immune infiltration detection analysis, and significant changes in central memory T-cells were found by analyzing T-cell-related subpathways, where INSR, HLA-B, IFITM1, and HBEGF were significantly differentially expressed. We selected 632 hospitalized patients for validation and found that INSR and HLA-B expression were associated with DCM development by Nomogram. The expression of HLA-B in peripheral blood T-cells was higher in DCM patients than in the normal group, as verified by qRT-PCR. However, the detailed mechanism needs to be further explored.</p>

収録刊行物

  • International Heart Journal

    International Heart Journal 64 (6), 1054-1064, 2023-11-30

    一般社団法人 インターナショナル・ハート・ジャーナル刊行会

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