Bayesian model and posterior distribution dataset for estimating the distribution of <sup>137</sup>Cs concentrations in various wild mushroom species in Japanese municipalities
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- Komatsu Masabumi
- 作成者
メタデータ
- 公開日
- 2023-06-28
- 利用開始日 (公開予定日)
- 2023-06-28
- 最終更新日
- 2023-06-30
- 資源種別
- Dataset
- サイズ
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- 6.9MB
- バージョン
- 1.0
- 権利情報
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- CC BY-NC-ND 4.0
- DOI
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- 10.50853/data.jjfs.23160467.v1
- 10.50853/data.jjfs.23160467
- 公開者
- Japanese Forest Society
- データ作成者 (e-Rad)
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- Komatsu Masabumi
説明
<h4>Komatsu_2023JJFS_stan_model.stan</h4> <p> - Model file for Bayesian analysis with rstan.</p> <p> - Hierarchical Bayesian model with the ordinary logarithm of 137Cs concentration in wild mushrooms as the objective variable and the random effects of the mean concentration for species (r_sp), the error in concentration per species (r_sigma) and the concentration effect per municipality (r_mun).</p> <p> - Consists of eqs. (1)-(5) in RELATED MATERIALS 1.</p> <h4>post_stan.RData</h4> <p> - RData file to store the results of the posterior distribution obtained by the hierarchical Bayesian model (post: variables in list format)</p> <p> - post$species: species names corresponding to columns in rsp and rsigma</p> <p> - post$rsp: random effect of species</p> <p> - post$rsigma: standard deviation of individuals by species</p> <p> - post$mu_sp: hyper parameter of mean in rsp</p> <p> - post$sigma_sp: hyper parameter of standard deviation in rsp</p> <p> - post$mu_sigma: hyper parameter of mu in rsigma</p> <p> - post$sigma_sigma: hyper parameter of standard deviation in rsigma</p> <p> - post$sigma_mun: hyper parameter of standard deviation in rmun</p> <p> - Posterior results of random effects of municipality (rmun) is excluded.</p>