Biomolecular Computation Based on Cell Communication

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In this paper, based on the signaling mechanism of phosphorylation and dephosphorylation, we have designed rewriting rules for graph automata by related pathways in kinase computing for 3-SAT problem solving in which linear complexity of control-space and time is derived to achieve efficiency in theory. This work is important for pathway design of autonomous kinase computation that has biological faithfulness.

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