Meta-analysis of RNA Sequencing Data of Arabidopsis and Rice under Hypoxia

メタデータ

公開日
2022-01-01
DOI
  • 10.6084/m9.figshare.20055086.v1
  • 10.6084/m9.figshare.20055086
  • 10.6084/m9.figshare.20055086.v2
公開者
figshare
データ作成者 (e-Rad)
  • Tamura, Keita

説明

file1: Metadata of the RNA-Seq experiments used for meta-analysis. (a) Arabidopsis, (b) rice. file2: TPM values of the RNA-Seq experiments. (a) Arabidopsis, (b) rice. file3: HN-ratio of the RNA-Seq experiments. (a) Arabidopsis, (b) rice. file4: HN-score of the transcripts in each species. (a) Arabidopsis, (b) rice. The suffixes indicate At (Arabidopsis thaliana), Os (Oryza sativa), and Hs (Homo sapiens). file5: HN-score of the hypoxia-inducible transcripts in each species. (a) Arabidopsis upregulated, (b) rice upregulated, (c) Arabidopsis downregulated, (d) rice downregulated. Columns with gene ontology (GO) names indicate annotation of the enrichment analysis in Metascape. 1 is having the annotation, and 0 is not having the annotation. file6: HN-score of the genes related to general phenylpropanoid pathway. (a) Arabidopsis, (b) rice.

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