Meta-analysis of RNA Sequencing Data of Arabidopsis and Rice under Hypoxia

Metadata

Published
2022-01-01
DOI
  • 10.6084/m9.figshare.20055086.v1
  • 10.6084/m9.figshare.20055086
  • 10.6084/m9.figshare.20055086.v2
Publisher
figshare
Creator Name (e-Rad)
  • Tamura, Keita

Description

file1: Metadata of the RNA-Seq experiments used for meta-analysis. (a) Arabidopsis, (b) rice. file2: TPM values of the RNA-Seq experiments. (a) Arabidopsis, (b) rice. file3: HN-ratio of the RNA-Seq experiments. (a) Arabidopsis, (b) rice. file4: HN-score of the transcripts in each species. (a) Arabidopsis, (b) rice. The suffixes indicate At (Arabidopsis thaliana), Os (Oryza sativa), and Hs (Homo sapiens). file5: HN-score of the hypoxia-inducible transcripts in each species. (a) Arabidopsis upregulated, (b) rice upregulated, (c) Arabidopsis downregulated, (d) rice downregulated. Columns with gene ontology (GO) names indicate annotation of the enrichment analysis in Metascape. 1 is having the annotation, and 0 is not having the annotation. file6: HN-score of the genes related to general phenylpropanoid pathway. (a) Arabidopsis, (b) rice.

Related Articles

See more
Back to top